Dendrobium catenatum: 110099716
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Entry
110099716 CDS
T05027
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
dct
Dendrobium catenatum
Pathway
dct03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110099716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110099716
03019 Messenger RNA biogenesis [BR:
dct03019
]
110099716
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110099716
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110099716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
110099716
NCBI-ProteinID:
XP_020682616
LinkDB
All DBs
Position
Unknown
AA seq
177 aa
AA seq
DB search
MDDSSGAFSFDFETALDAGGEGGGEPSAVLGQGLHGDPRALAVPEIAVAPLDRRNFRRTV
CRHWLRGLCMKGASCGFLHQYDKEKMPVCRFFRNFGECREKDCLYKHTIEEIKECHMYMM
GFCPNGPGCRFKHSKLPGPPPPVEEVLKKIQQLSSLSSYGSSNRQFHPRNASFNSFS
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggatgattccagtggggctttcagctttgacttcgaaacagcgcttgacgccggcggg
gaaggcggtggtgaaccctctgcggttttggggcagggtcttcatggagatccgagagca
ctagcagtgccggaaatcgccgttgcgccgttggaccgtaggaatttccggcggacggtg
tgccggcactggctgcgtggtttgtgcatgaagggtgcgtcttgcgggtttctccaccag
tatgataaagagaagatgccggtttgccggttcttccggaactttggtgagtgcagggag
aaggattgtctctacaagcacaccatcgaggagatcaaggagtgtcacatgtatatgatg
ggattctgccccaatggacctggctgcagatttaaacactcaaagctgcctgggccacct
ccccctgtagaagaagttctcaagaaaattcagcagctgagctcattgagcagctatggc
tcttcaaacagacaattccatcccagaaatgccagtttcaacagtttctcttga
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integrated database retrieval system
