Dendrobium catenatum: 110102304
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Entry
110102304 CDS
T05027
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dct
Dendrobium catenatum
Pathway
dct03022
Basal transcription factors
dct03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110102304
09124 Replication and repair
03420 Nucleotide excision repair
110102304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dct03021
]
110102304
03400 DNA repair and recombination proteins [BR:
dct03400
]
110102304
Transcription machinery [BR:
dct03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110102304
DNA repair and recombination proteins [BR:
dct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110102304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
110102304
NCBI-ProteinID:
XP_020686246
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MPQVRIVAKNFMDMVAVLPAMKLDKLYESTFICEAVLRSLPPLAKKYALQMLFIESPVTA
KSFEEWVLPDGFSKHRVAIERLLQLRVFLETNDRKKETSYTMNPKFQSNMRKYLVQGGTL
PREPMSLGVTVRLPTLEDLEAYAHKQWECFLLQLINSAQAQRLTNFSSSMIRVFQRGLLS
SRENEAPRLTENGFQFLLMDTNAQLWYIIREYITTSEDRGIEPTDLISFLLELSFHSLGE
AYNMNSLTDVQCKAIKDLADLGVVKLQQGRKESWFIPTKLASNLSISLSDSSSRRQGFVV
VETNFRMYAYSTSKLHSEILRLFSRIEYQLPNLIVAAITKESLYTAFENGITADQIISFL
QQNAHPRIVERVPTVPENVTDQIRLWETDRNRVEMIPSHIYEDFPSKEVFEGAADFAREV
GGLLWEDSNKMRLIVRGELHQQMRDFLRRSK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggtgaggattgtcgcgaagaactttatggacatggtggcagtgctacctgcc
atgaagcttgacaagctctacgagagtacctttatctgtgaggctgtgctcaggtctttg
ccacctttggctaagaagtatgctttgcaaatgctatttattgaatccccagttacagcc
aagtcatttgaagagtgggttttgccagatggattctctaagcatagagtggcaattgaa
cggttattgcagctgagagtttttcttgaaactaatgataggaagaaggagaccagttac
acaatgaatcctaagttccagagtaacatgcgaaagtacttggtacagggtggaacttta
cctagagagccaatgtccttgggtgtaacagtgagattaccaactttggaggacttggaa
gcctacgcacacaagcaatgggagtgtttcttgttacaactcataaattcagctcaagca
caaaggttgacaaatttcagttcgtctatgattagagtttttcagcgtggccttctaagt
tcaagagaaaatgaagctccaaggttaactgagaatggtttccaattcctgctaatggat
acaaatgctcaactttggtatataataagagaatacattacaacttctgaggaccgtgga
atagagcccactgatctgatatcgtttctacttgagctaagttttcattcactgggagag
gcttataatatgaacagtcttactgatgtgcaatgcaaagctatcaaggaccttgcagac
ttaggagtagtgaaactccagcagggaaggaaggaaagttggtttatcccgaccaaattg
gcttccaatctttctattagcttgtcagattcatcttcacgcaggcagggatttgtggtc
gtggaaacgaacttcaggatgtatgcatattctacatccaaattacacagcgagattcta
cgcttattttcaaggattgaataccaacttccaaaccttattgttgcggcaataacgaag
gaaagcctatatacagcttttgaaaatggaatcactgctgatcagattatttctttcctt
cagcagaatgctcatcctcgaattgtagaaagagtaccaacagtgccagagaatgtcact
gatcagattaggttatgggaaacagatcgaaacagggttgagatgattccttcacatatt
tatgaagattttccatcaaaggaggtatttgaaggagccgctgacttcgcacgggaggtt
ggtggtttgctatgggaagactcgaacaaaatgcggttgattgttcgtggcgaactgcac
caacaaatgagagatttcctccgtcgctctaagtag
DBGET
integrated database retrieval system
