Dendrobium catenatum: 110113457
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Entry
110113457 CDS
T05027
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
dct
Dendrobium catenatum
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dct03009
]
110113457
Ribosome biogenesis [BR:
dct03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
110113457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
WDR54
Ge1_WD40
DUF5984
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
110113457
NCBI-ProteinID:
XP_020701717
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MMELIVASSSVDTGIGCWDLVSGAEQLRYRSSASPPHGLISVSRRFLASSQLRENPSSSS
APIFFWSWEKPQVQVRSFPAEPIGPLVSDSDGSYIIGGGPSGAIYLWEVASGKLLNKWTA
HYRSVTCLTLSDDESLLISGSEDGSIRVWPLLMIFDDIAKESGENIYRYNFSEHALRVTS
VISGHGLCNSIVISSSEDRTCKVWSLSEGRLLRSISFPSIIDAIAMDPGEHIFYAGCRDG
KIYVAALNVEWNPVRNYGKFIIDSLSDNSKAITCLAFSLDGVSLVSGSEDGMIRVWNTKT
GQMTRLLKHAKAPVSNVIIVRQPNKINQVSLSKKLELALMAPPLDKYTESREDGVESKAV
KMIHQISDDLDNSSYCAASVMSSQIKELQQNASTGAVQMELERLRAECKRSMQMVQQWKK
LYNDLQTTFVNELLNGVNVDGS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttgatagtggcatcctcctcggttgatactggtatcgggtgttgggacctc
gtttctggcgccgagcagctccgctatcgttcctctgcctcacctccccatggattaatt
tccgtctccaggcgtttccttgcctcttcacaactccgtgagaacccttcttcctcctcc
gctcccatcttcttctggtcctgggagaagcctcaggtccaggttagaagcttccctgct
gaacctattggtcctctggtttctgattctgatggttcctacatcattggcgggggtcca
tctggtgcaatatatttatgggaggtagcgagtggcaagctcctcaacaaatggaccgca
cactacaggtctgttacttgcctcactctatctgacgatgagtcccttctgatttctgga
tctgaggatggaagcatcagagtttggcctcttttaatgattttcgatgatatagcaaaa
gagtctggagagaatatttacagatacaatttctcagagcacgctttacgggtaacatct
gttatttcaggccatggattgtgtaattcaattgttatctcatcctcggaggatcgcacc
tgcaaggtttggagtttatcggaggggaggttgctaagaagcatttcatttccttccata
attgatgcaattgcaatggatcccggggagcatatattttatgctggttgtagagatggc
aaaatatatgttgccgcacttaatgttgagtggaatcctgttagaaactacggaaaattt
attatagattcattatctgataacagtaaggctataacttgcctagcatttagcttggat
ggtgtctcccttgtatctggatcagaggacggtatgatcagggtttggaacactaaaact
ggacaaatgactcgattgttgaaacatgccaaagctcctgtcagtaacgttattattgtc
agacaacccaataaaattaatcaagtatccttatctaaaaagctcgagctagcgttaatg
gcgccacctttggataagtatactgagtccagagaagatggagttgagagcaaggctgtt
aaaatgattcatcaaatttctgatgacttggataacagcagctactgtgctgccagcgtg
atgagcagtcagataaaagagcttcagcaaaatgcttctactggagctgtacaaatggag
ttggaaagattgagagcagaatgcaagagatctatgcaaatggtccagcagtggaagaag
ttatataacgaccttcagactacctttgttaatgagcttcttaatggagttaacgttgat
ggtagctga
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