Dendrobium catenatum: 110113459
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Entry
110113459 CDS
T05027
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110113459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110113459
03036 Chromosome and associated proteins [BR:
dct03036
]
110113459
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110113459
Chromosome and associated proteins [BR:
dct03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110113459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110113459
NCBI-ProteinID:
XP_020701720
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MFGSTNPFGQSSSSPFGSPSVFGQTNSAANNPFAPKPFSSPNLFSSQTGLSAFGVSTGVF
GQPTTPAFGASSTPAFGASSTPAFGSSMPSFGASSTPAFGTSSSSFGGSSVFGQKPAFGG
FGSTPSQASPFGSSFQQTQPAFGSSLFGSSSPFGASSQPAFGATSAPAFGSTSSPAFGAT
STPAFGASSTPAFGAASTPAFGSNTTPAFGSTTTPLFGNTGMSFGASSTPAFGAQSTSLF
GSSSTPAFGGSSTPAFGSSSSPAFGGSSTSSFSFGSSPSFGQSTPTFGSSPFSSTPSPFG
AQSSPFGTQTPTPTFGSPGFGQSTFGSQTGGSRVAPYSATPEPDASGTQPAGKLESISAM
PIYKDKSHEELRWEDYQRGDKGGPNPAGQSGGISFPTSTQANPFGQTSPFGQTSPFGQTS
PFGQTSTFGQTSAFGQPAANPFSSTTSSNPFAPKTPAFGSTGFGSSSASLFSSPFSSSST
SPFGSTSSTPSLFGAPSASGFGSSTSSSIFGGGSAPAFGSSPSIFGSSMAGSASSFGSGL
TFGNTQSSGLFSSTPSIGQTPSPFGQSTGFQQSMPAFGSSLFSAQPTGFGGSPFSSSTPS
LSNPVGFGQATPSLSTPFQQSAPAQTSSTFSFGNFGQTQTAPSGGFGSFPSTFNQGTFGQ
SNPAIQANIVMQPTSITNPFGTLPVMPQMSIGRVGSSAPSVQYGISSMPISDKPAPVRIS
SLVAPRHISQRRIRLPARRYHPKSDSERVPFFTDDELAPGTPKADALFIPRENPRALIIR
PNEQWPSTNGANKQSVLKNNFGSASVNGKLSTVPSAPILGESHAADLDAIIAGVPAENGH
AEQTPSKPPQHPNGLKDNHTERVKEPHFSISSRRASEAAISYEHGADIEALMPKLSLDNY
YSEPSIPELAAKERAEPGFCRRVKDFVVGRKAYGSIKFLGETDVRRLDLESIIQFNHREV
VVYSDESTKPPVGQGLNKPAEVTLLNVKCLNKKTGQKYIEGPKVEKYSEMLKKKSLEQGA
EFVAFDAVKEEWKFRVKHFSRYEFLVEEDDDFTS
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctccaccaatccttttgggcagtcttcaagcagcccgtttggttctccttca
gtgtttgggcaaacaaacagtgctgccaataacccttttgctccaaagccatttagtagt
ccaaatctttttagttctcagacaggtctttcagcgttcggcgtatcaactggggtcttt
gggcaacccactacaccggcatttggtgcttcatctacaccagcatttggtgcttcatct
acgccagcatttgggagttcaatgccttcctttggggcttcatctaccccagcatttggg
acctcttcgtcttcttttggtggatcttctgtttttgggcaaaaaccagcttttggagga
tttggatctactcccagccaagctagtccatttggcagctcatttcaacaaactcagcca
gcatttggaagcagtctgtttggttcttcctcaccatttggtgcttcaagtcaacctgcg
tttggtgccactagtgccccagcatttggttcaacaagctcgccagcatttggtgcaact
tctaccccagcatttggtgcatcaagcaccccagcttttggtgctgctagcactccagcc
ttcggttctaacaccacaccagcatttggctctacaacaacccctttgtttggtaataca
ggaatgtcattcggggcatccagtaccccagcattcggtgctcaaagcacatcattgttt
ggttcttcaagcactccagcatttggtggatcaagtactccagcttttggttcttccagt
tctccagcttttggtggatcaagtacatcttccttcagctttggttcttcaccatctttt
ggccagtcgacacccacatttggtagctcaccatttagttcaacgccctcgccttttgga
gctcagagctctccatttggaactcagacaccaacacctacatttgggagtcctggtttt
ggacaatcaacttttgggagtcaaactggaggcagtagagtagcaccctatagtgcaaca
ccagagcctgatgctagcggtacacagcctgctggaaagctagagtcaatatctgcaatg
cctatttacaaagataaaagccatgaggaattgagatgggaggattatcaacgtggcgat
aaaggtggtccaaaccctgctggacaatcaggtggaattagtttccctacttcaacacag
gcaaatccatttggtcaaactagtccatttggccagacaagtccatttggtcagacaagt
ccatttggtcaaactagtacttttggtcaaacgagtgcatttgggcagcctgctgcaaat
cctttctcatccacaacttcttcaaatccttttgctcctaaaactccagcttttggttct
actggttttggatcatcatcagcttcactttttagctcaccattctcttcatcttcaaca
agcccttttggttcaacttcttccaccccttcactgtttggtgcacctagtgcctctgga
tttggttctagtacttcatcctcaatttttggcggtggaagtgcgccggcatttggctct
tcaccttctatttttggctcctcaatggcgggatccgcttcttcctttggatctggtcta
acttttggcaacactcagtcatctgggctgttttcttctactccttccattgggcaaaca
ccttcgccctttgggcagtctactggtttccaacagagcatgccagcttttggttctagt
ctattcagcgcacaaccaactggctttggtggaagcccattcagcagttcaacaccttca
ttgagcaatcctgtaggatttggtcaagcgactccatctctttccactccttttcaacag
tctgctcctgcacaaacgtcaagtaccttttcttttggtaatttcggtcagacgcaaaca
gctccttctggagggtttggcagcttcccgagcacctttaatcagggaacttttggacag
agcaatcctgccattcaagctaacattgttatgcaacccacttccatcacaaatcctttt
ggaacgctccctgtgatgcctcagatgtcgattggtcgtgtgggatcttctgctccatca
gttcaatatggaatttctagcatgcctatttctgacaaaccagctccagtaaggatatca
tctttagtggctcctagacacatatcacagagaagaatccgtttgccagcaaggagatac
catcctaaaagtgatagtgaaagggtaccgttcttcactgatgatgaactggctccagga
actccgaaggcagatgcactatttatcccaagggagaatccaagggcactgattattcgt
ccaaatgaacaatggccatctacaaatggcgctaacaaacaatcagtgctgaaaaacaat
tttggttccgctagtgtcaatggtaaactttctacagtgccatcggctcccattctgggt
gaatcccatgcagctgatcttgatgccattattgcaggagtcccagctgagaatggccat
gcagaacaaactccatctaaaccccctcaacatccaaatggccttaaagacaaccacact
gagagggtcaaagaaccccacttctcaatctccagccgcagagccagcgaggctgccatt
tcttatgaacatggcgccgacatcgaagcactcatgccaaaactctctcttgacaactac
tattctgaaccaagcattcctgaactggcagccaaggagcgagctgagcccggattctgt
cgccgagtaaaagattttgtcgtcggtcgcaaagcctacggaagcataaaattcttgggc
gaaaccgatgtgcgaagactcgacctcgagtccatcattcagttcaaccatcgtgaggtg
gtcgtctacagtgatgagagcactaagccacctgtaggtcagggactcaacaaaccagct
gaagtgacccttctgaacgtcaaatgcttgaacaagaaaactggacagaaatatattgaa
gggccaaaggttgagaaatatagtgagatgttgaagaagaagagtctggaacagggagct
gagtttgtagcatttgatgcagtgaaggaggaatggaagttcagagtgaaacatttcagc
agatatgagtttctagttgaggaagatgatgattttacctcttaa
DBGET
integrated database retrieval system
