Dickeya dadantii 3937: Dda3937_03372
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Entry
Dda3937_03372 CDS
T01305
Symbol
pelD
Name
(GenBank) pectate lyase D
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00040
Pentose and glucuronate interconversions
ddd01100
Metabolic pathways
ddd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dda3937_03372 (pelD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dda3937_03372 (pelD)
Enzymes [BR:
ddd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dda3937_03372 (pelD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
ADM99552
UniProt:
E0SAZ3
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All DBs
Position
3577236..3578414
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AA seq
392 aa
AA seq
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MNNTRVSSVGTKSLLAAIIATSMMTWSVNAATLQTTKATEAASTGWATQGGGTTGGAKAA
SAKIYAVKNISEFKAALNGTDTDPKIIQVTGAIDISGGKAYTSFDDQKARSQISVPSNTT
IIGIGSNGKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYEEGDGWNAEWDAAVIDNSTR
VWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISSSRFELHDKTILIGH
SDSNGSQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKNSVYPYLYSFGL
GTSGSILSESNSFTLSNLKSIDGKNPECSIVKQFNSKVFSDNGSLVNGSSTTKLDTCGLT
AYKPTLPYKYSAQTMTSSLASSINSNAGYGKL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacacgagtgtcttccgtaggtaccaaaagcttgctggcagccatcatcgct
acatcgatgatgacctggtcagtcaatgcagccacgctgcaaaccaccaaggcgacagaa
gcagcgtcaactggctgggcaacgcagggcggcggcaccaccggcggcgccaaagcagcc
tcagccaaaatctatgcagtaaaaaacatcagcgaatttaaagcagcactgaatggcacc
gacaccgatccgaaaatcattcaggtgaccggcgctatcgatatcagcggcggcaaagcc
tacaccagctttgacgatcagaaagcccgcagccagatcagcgttccgtccaacaccacc
atcatcggtattggcagcaatggcaaattcaccaacggctctctggtcatcaaaggcgtg
agtaacgttatcctgcgtaacctgtatatcgaaacgccggtggatgtagcaccgcattac
gaggaaggggatggctggaacgccgagtgggatgcggcggtgatcgacaattccacccgc
gtttgggttgaccatgtcaccatcagcgacggcagcttcaccgatgacaaatacaccacc
aaagacggcgaaaaatatgtgcagcacgacggcgcgctggatatcaagaaagggtccgac
tacgtcaccatttccagcagccgcttcgaactgcatgacaaaaccatcctgatcggccac
agcgacagcaacggctcacaggactccggcaaactgcgcgttaccttccacaacaacgtg
tttgaccgtgtaaccgaacgtaccccgcgcgtacgctttggtagcatccacgcatataac
aacgtgtatctgggcgacgtgaaaaacagcgtctatccgtatctgtacagcttcggtctt
ggcaccagcggcagcatcctgtcggagtccaactccttcacgctctccaacctgaagagc
attgatggcaaaaatccagaatgcagcatcgtgaagcaattcaacagcaaggtattctcc
gataacggctcactggttaacggctcgtcaaccactaagctggacacttgcggcctgacg
gcttacaaaccgactctgccgtacaaatattcggctcagaccatgacaagtagcctggct
agcagcatcaatagcaatgcaggatacggcaaactgtaa
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