Deferribacter desulfuricans: DEFDS_0033
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Entry
DEFDS_0033 CDS
T01188
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00540
Lipopolysaccharide biosynthesis
ddf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DEFDS_0033 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ddf01005
]
DEFDS_0033 (lpxC)
Enzymes [BR:
ddf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
DEFDS_0033 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
ddf01005
]
Lipid A
DEFDS_0033 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
DUF1507
Motif
Other DBs
NCBI-ProteinID:
BAI79545
UniProt:
D3PAC2
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All DBs
Position
complement(39994..40902)
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AA seq
302 aa
AA seq
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MYQTTIKDKLIFSGKGLHSGKFVKAVVYPALPDNGITIRRADIPGSEPIKLNPYNVVSTV
LATTVNCGNYKIATVEHILSAVYGLGIDNIHIDVYGEELPILDGSAAAFVDQFINVGIKQ
LKKKRKYLKFTKRIRIEKGDKWIELIPSRYFKVTFGINFDNKLINEQKKFLTLTPETYAK
EVAKARTFGFKNEVEMLWKMGLAKGGSLENAIVIDKDKILNEDGLRYNDEFVRHKILDLI
GDISLIGYRFYGHIRAYKSGHELNNYFAKTLLESKSCYKVVELDEQYNFNPYKSLVLEPQ
GT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaacaacaataaaagataaattgatttttagtggtaaagggttacactctgga
aagttcgttaaagctgttgtttatccagctttgccagataacgggataacaataagaagg
gctgatatccctgggagtgaaccaataaaattaaacccttacaatgttgtatctaccgtt
ttagcaacaactgtaaactgtggaaattataaaattgccactgtagagcatattctctct
gcagtttatgggcttgggatagataatattcatattgatgtttatggtgaagagctacca
atattggatggaagtgcagctgcttttgtagatcaatttataaatgtaggaataaaacag
cttaaaaagaaaagaaaatatcttaaatttacaaaaaggataagaatcgaaaaaggggac
aaatggatagagctcatcccttctcgttatttcaaagtaacttttgggattaattttgac
aacaaattgataaatgagcagaaaaagtttttaactcttactcctgaaacttacgcaaaa
gaggttgcaaaagctagaactttcggatttaaaaatgaagttgaaatgttatggaaaatg
ggattagcaaaaggtggttctttagagaatgcaatagttatcgataaagataaaatctta
aatgaagatggtctaagatacaacgatgaatttgtaagacacaagattttagatttaata
ggtgatatttccttaattggttatagattttatggtcatatcagagcatataaatcagga
catgaattaaataattattttgcaaagactttattagaatcaaaaagctgctataaagta
gtagagctagacgaacaatacaactttaatccatataaatcattagttttagaaccacag
gggacataa
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