Deferribacter desulfuricans: DEFDS_1038
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Entry
DEFDS_1038 CDS
T01188
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00540
Lipopolysaccharide biosynthesis
ddf01100
Metabolic pathways
ddf01250
Biosynthesis of nucleotide sugars
Module
ddf_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DEFDS_1038 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ddf01005
]
DEFDS_1038 (kdsA)
Enzymes [BR:
ddf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DEFDS_1038 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ddf01005
]
Lipid A
DEFDS_1038 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
R-HINP1I
DUF5091
NeuB
Motif
Other DBs
NCBI-ProteinID:
BAI80508
UniProt:
D3PD35
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All DBs
Position
1037669..1038439
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AA seq
256 aa
AA seq
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MLIIAGPCVYENDNIAFKTCEFLKKLCEKYGFEYVYKTSYDKANRSSVHSYRGPGIEKGV
EFFIKLKEKFGVKILTDFHSEKEADIIKDYVDILQVPAFLCRQTDILKAAAKSGKIVNVK
KGQFMAPWDMKNVVEKLTYFGAKEIMITERGYSFGYNNLVVDYRSFPIMKEFCDNIIFDV
THSVQLPGGKGFASSGERRFAPYLARAAVACGVDGLFMEIHPDPDSALCDGANMLDFQMT
EKLFDEIKRIWDTLWM
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcttattattgcaggtccttgtgtttatgagaatgataatatagctttcaaaacttgt
gaatttttaaaaaagttgtgtgaaaaatacggttttgaatatgtttataagacctcttat
gacaaagcaaatagaagttctgtgcattcatatagagggcctggcattgaaaaaggggtg
gagttttttattaagttaaaagaaaagtttggtgttaagattttaacagattttcattca
gaaaaggaagccgatataattaaggattatgtggatattttgcaggtacccgctttttta
tgtagacaaacggatattttaaaagctgctgccaaaagcgggaagatagttaatgtaaaa
aaagggcaatttatggcaccgtgggacatgaaaaatgtcgttgaaaaattaacatatttt
ggtgcaaaagaaattatgattacagaaagagggtatagttttggctataataacttggtt
gtagattatagaagttttccaattatgaaggaattttgtgataatataatatttgatgtt
acgcattctgtgcaactacctggtggtaaaggttttgcttctagtggtgaaagaagattt
gcaccttatttagcacgtgctgctgtagcttgtggtgtagatggattatttatggagata
cacccagatcctgatagcgctttatgtgatggagctaatatgctcgattttcaaatgact
gaaaagctttttgatgaaataaaaagaatttgggatacattatggatgtga
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