KEGG   Desulfitobacterium dehalogenans: Desde_4067
Entry
Desde_4067        CDS       T02146                                 
Name
(GenBank) superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
  KO
K02240  competence protein ComFA
Organism
ddh  Desulfitobacterium dehalogenans
Brite
KEGG Orthology (KO) [BR:ddh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ddh02044]
    Desde_4067
Secretion system [BR:ddh02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   Desde_4067
SSDB
Motif
Pfam: Helicase_C ResIII DEAD AAA_30
Other DBs
NCBI-ProteinID: AFM02328
UniProt: I4AEE3
LinkDB
Position
complement(4146313..4148178)
AA seq 621 aa
MMFYLFVADSGELTLSPLLDDRHFTEEFEVLRPGLPLSFAQFLLEEIHFKRMGSIKAKVL
SLWEVYAKEKGRDKNRDGAWVKREILKILRKQPGLKDRNWCWEKKTGLPESPLRSNLKNI
TEKERVQDFLDRTTGRLLAKADLQRLGQECRLSYTEILTLCHEQVMKGYAQWIPAVKREG
KGWRCERCGDALVEEWTSIYGLAATCPACTSLGAVSSLHELYRSIAPSPMSSLSSTETVH
SASSSFHGRSNISWVFSPRWELSQAQKLAAQQVLNFVKGGAIDYNMIQGEDSRKEMLLWA
ACGAGKTEVCFPAAAWALEQGKKVLFAAPRQDVVLDVAPRLQQDFPGLKLSILTGTSQER
FTPAPFVLATTHQILRFSQAFNLIFLDEMDAFPYYGNTALTWGMERALGPGGKIVYLTAT
PSPESLEKVKAGRVGLIRLPARHHGKAVPVPQWQKVSGSLDPECLYHKGQGQKVFDWLKE
LALLGPVLLFVPKISWVNPWVEILRKEFPQWAISGSYSADPHRGEKIEALRNKMFRVFVC
TSVLERGVTIPNVQIIVLEADHGIFDERALVQMAGRVGRTQENPTGNALFLSSKRTPSIE
KAIYWIKEQNEIAFAQGLIDN
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgatgttctacctttttgttgcagattcgggggaactgacactttcccctctgttagat
gatagacatttcacagaggagtttgaggtgttgcggcccggacttcccttaagctttgcc
caatttcttctcgaagaaatccactttaagaggatgggatccataaaagctaaggtgctt
tctctatgggaagtttatgcaaaggaaaaagggcgggataaaaatagggatggggcatgg
gttaaaagagagattctcaagatcttgcggaagcagcccgggttaaaggaccgcaattgg
tgttgggagaaaaagacaggtttgcctgagagtccgttgaggagcaatctaaagaacata
acagagaaagaaagagttcaggatttcttggatagaactacgggcagattattagctaag
gctgatctccagcggctggggcaggaatgtcgcctatcctatactgaaatcctgaccctt
tgccatgagcaggttatgaaagggtatgcccaatggattcccgcagtaaaaagggaaggg
aagggctggagatgcgaacgctgcggggatgctttggttgaagaatggacaagcatctat
ggattggccgctacttgtcctgcctgcacttccttaggggcagtaagctcacttcatgaa
ctctaccggagtattgccccttccccaatgagttccctctcctctacggagactgttcat
tcggcttcctcctcttttcacggccgtagtaacatttcttgggtattttcccctcgttgg
gaacttagccaggcccaaaagcttgcggcccaacaggttttaaattttgtaaaagggggc
gctatagactataacatgattcaaggagaagactccaggaaggaaatgctgctctgggcg
gcgtgtggagctgggaagaccgaagtctgctttcctgctgcggcatgggcacttgaacaa
gggaaaaaggtattatttgctgcacctcgtcaagatgtggttctggatgtagcccctcgt
ctccaacaggattttcccggcttaaagctgagtattctcacgggaacaagtcaggaacgt
tttacaccggctccctttgtcctggccactacccatcaaatcctgcgtttttcacaggct
tttaacctaatctttcttgatgagatggatgcctttccctactatggcaatacagcctta
acttggggaatggagcgggcattgggtccgggaggaaagatagtctatctgacagctact
ccctcgccggaaagcttggagaaggttaaagcaggaagagtggggctcatccgccttcct
gcccgtcatcatggcaaggcagttcccgtccctcagtggcaaaaggtttcggggagcctg
gatcctgagtgtttataccataagggacagggacaaaaggtctttgattggcttaaggag
ttggctctattgggtcctgttcttctctttgttccgaaaatatcctgggtcaacccttgg
gtcgaaatcctaagaaaggagttcccccaatgggcaatctctggaagctatagtgccgat
ccccatcgcggtgaaaaaatcgaagctctgcggaacaaaatgtttcgagtctttgtctgc
acttcggttcttgaacggggggtcaccatacctaatgttcaaatcatcgtccttgaagcg
gatcacggaatttttgacgagagagccttggtccaaatggccgggcgagtgggtaggact
caagagaatcccactggaaatgcacttttcctatcctccaaaagaacgccttctatagaa
aaggcgatttattggattaaagaacaaaatgagatagcgtttgcacagggtttgattgat
aattaa

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