Dictyostelium discoideum (cellular slime mold): DDB_G0275717
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Entry
DDB_G0275717 CDS
T00245
Symbol
thoc1
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03013
Nucleocytoplasmic transport
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0275717 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
DDB_G0275717 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0275717 (thoc1)
03041 Spliceosome [BR:
ddi03041
]
DDB_G0275717 (thoc1)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DDB_G0275717 (thoc1)
Spliceosome [BR:
ddi03041
]
Complex C
Other components
EJC/TREX
DDB_G0275717 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DDB_G0275717 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
8620181
NCBI-ProteinID:
XP_643594
dictyBase:
DDB_G0275717
UniProt:
Q552T7
LinkDB
All DBs
Position
2:6009402..6012149
Genome browser
AA seq
726 aa
AA seq
DB search
MQSNLINLFNGIIKREINVFNDVVVVDDVVEKKDTEMTDDSTPSLDNEDQSTPPQPSQPS
QIQPNKLLFNKDSLLKEIQKIYPNIKDPIQIEIKTSIDLNIRIFFNNLIKQIDITYENID
LAIKLAYSFVELGILDSILPLQLSEDLFETKTISKCLDLFGLLESRAEIFSQDPEIIKGR
KRNLLLKICIELLKRETNPDSCGRILLFLAYVFPLSDPSGLNTKGEHNIHPEEALDFQND
IMNNVNGNNNNNVNNSEDTTTTSTAATATVITTTNGNNDTTVDRNFYRQFWGLQTVFQNP
QQVLLNTTVTTGGTITNITLNKIKWESFIQSLELVIGSFSTHINLDELSQSSSNNPSKKH
YFTKYLTSSNLMKLQLKDSIFRKNILTQILITFQALDLTNQKYPTIFNDLQKNIIQELTN
KCFKILSNTNPNGEYFSNCLSSILKREKNWIIWKRDNQCKPFERPPCSPIVKKKKLFRKT
ALTKISLGNQELSRLWNLSGAPNDRSYLKTQNSVSLDSFIEPLKKETIEQEEKTKQEALK
LERRKKNEQKRSDAEKARRKEYDEKKAEFLLANPTKKDKDYQEYEELPAEVDSDDLSDLD
EPKELLRDNPVYIWKTLRLISRKRLELFKNPKFDDIIQSFIKPTITQSQAVSTATPPPTT
TTTTSTTAPPTITTATATTSPPPPVTPVVSTTTTPTQIASTSSPTIENLSQNEKIEQIAS
NTPMEE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaaatcttataaatttatttaatggtataattaaaagagaaataaatgttttt
aatgatgttgtagttgttgatgatgttgttgaaaaaaaagatacagaaatgactgatgat
agtactccgtcattagataatgaagatcaatctacaccaccacaaccatcacaaccatca
caaatacaaccaaataaactattattcaataaagatagtttacttaaagaaattcaaaaa
atatatccaaacataaaagacccaattcaaatagagattaaaacttcaattgatttaaat
attagaattttctttaataatttaataaaacaaatagatataacttatgaaaatatagat
cttgcaataaaattggcatattcatttgttgaattgggtatattagattcaattttacca
ttacaactttcagaggatctttttgaaacgaaaactattagtaaatgtttagatttattt
ggtttattagaatctagagctgaaatcttttcacaagatccagaaattattaaaggaaga
aaaagaaatttattattaaagatatgtattgaattattgaaaagggaaaccaacccagat
tcatgtggtcgtattttattatttttagcatatgttttcccattatctgatccatcaggt
ttaaatacaaaaggtgagcacaatattcatcctgaagaagctttagattttcaaaatgat
ataatgaataatgtaaatggtaataataataacaatgtaaataatagtgaagatacaaca
acaacatcaacagcagcaacagcaacagtaataacaacaacaaatggtaataatgataca
acagttgatagaaatttttatagacaattttggggattacaaactgtttttcaaaatcct
caacaagttttattgaatacaacagtaacaactggtggaactattacaaatataacatta
aataaaattaaatgggaatcattcatacagtcattagagttggttataggatcattttca
actcatatcaacttggatgaactttctcaatcatcctcaaataacccatctaaaaaacat
tatttcacaaaatatctaacaagtagtaatttaatgaaacttcaacttaaagattctatc
tttagaaagaatattttaactcaaattttaataacttttcaagctttagatttaacaaat
caaaaatatccaacaatttttaatgatttacaaaaaaatataattcaagaattaacaaat
aaatgttttaaaattttatcaaatacaaatccaaatggtgaatatttttcaaattgttta
tcatcaatattaaagagagagaagaattggatcatttggaaacgagataatcaatgtaaa
ccatttgaaagaccaccatgtagtccaattgttaaaaagaagaaattatttagaaagaca
gcattgacaaagatatcattaggtaatcaagagttatctagactttggaatctttcaggt
gcacccaatgatagatcctatttaaagactcaaaattcagtttcattagattcattcatt
gaacctttgaaaaaggaaaccattgaacaagaagaaaaaacaaaacaagaagcattgaaa
ttggaaagaagaaaaaagaatgaacaaaagagatctgatgctgaaaaagcaagaagaaaa
gaatatgatgaaaagaaagctgaattcttattggcaaatccaactaaaaaagataaagat
tatcaagagtatgaagaattacctgctgaagtagattctgatgatttaagtgatttagat
gaaccaaaagaactcttacgtgataatccagtttacatttggaaaactttaagattaatc
tctagaaagagattagaattatttaaaaatccaaagtttgatgatataattcaaagtttt
attaaacctacaataactcaatcacaagcagtatcaacagctacaccaccaccaacaaca
actacaactaccagtacaacagcaccaccaaccataacaacagcaacagcaaccacctca
ccaccaccacctgtaactcctgttgtttctaccacaaccacaccaactcaaatagcctca
acctcttctcctacaatcgaaaatttatctcaaaatgaaaagattgaacaaatcgcctca
aatactcctatggaggaataa
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