Dictyostelium discoideum (cellular slime mold): DDB_G0289479
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Entry
DDB_G0289479 CDS
T00245
Symbol
swp1
Name
(RefSeq) dolichyl-diphosphooligosaccharide-protein glycotransferase
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00510
N-Glycan biosynthesis
ddi00513
Various types of N-glycan biosynthesis
ddi01100
Metabolic pathways
ddi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
DDB_G0289479 (swp1)
00513 Various types of N-glycan biosynthesis
DDB_G0289479 (swp1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DDB_G0289479 (swp1)
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
8627154
NCBI-ProteinID:
XP_636216
dictyBase:
DDB_G0289479
UniProt:
Q54HG9
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Position
5:complement(2823825..2826023)
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AA seq
685 aa
AA seq
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MKLIILIVLSILISIVISGSVQSKITTTRGISNVYSKNDINNIKQFISSKYNGNTKLYGE
SLKDTFYGVGVLTRIGETNIEATKDICKQTKEQLKQNKFTDIELVFNGVTILSELKCLQG
ESSSSLGNEQQLQDLLKNKLENGSLLEKTQAINIYFTLSSAKAIDSKTVSIIDPLLIQAV
NSMVSLMDEDGTFKSVSTDDEGNLQNTAAAYFALARLSHRLKSNEVDKLVAKVVNKVDTV
LASADETTDSLYFNDLSTTSSLLHGLLSLASVNDKVADVISNKQINQISEYLLRQKNVES
LSDAYHLIVALKRCQKNSISQPISLALVKSIYSPSGLNDIRVRVTDIFDQPIEASIVINK
VVSSKNPRSTPILSGKEMKFQSSDNSFVADLSNENLKLGSYNFEFKVQPVDTDSYKSITN
IQIITITGAVTVNDMKLSYAPKSDQLGSPKTTNEVQFGQKLPLIEIPSNNIARIFFRIAS
EAQPYQAQQVGIRFYSPAREAVVPATYSADAYSYTFTNKDACKILGCQSGNYQLDLIIGD
QSITPLQWNFGEINLKFNQSTIPTNRYPEQLPISHNFRVAEKRPPQSISSLFTLLVLSPI
AIFVIGLLFVGTNLGRFPTGMGFIYTIGFLGCISATGLLIVNYWLHSTMDVTLKNLALLM
IPLVFFGHKSMSYYSNLSSSNIKKD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaattatattaattgtattaagcattttaatatcaattgtaatttcaggatca
gtacaaagtaaaattactacaacacgtggtattagtaatgtatacagtaaaaatgatata
aataatataaaacaattcatttcaagtaaatacaatggtaataccaaattatatggtgaa
tcattaaaggatacattttatggagttggagttttaacacgtattggtgaaacaaatatt
gaagcaacaaaagacatttgtaaacaaaccaaagaacaattaaaacaaaataaatttaca
gatattgaattagttttcaatggagttactatcctttcagaattaaaatgtttacaaggt
gaatcatcatcatcattgggaaatgaacaacaattacaagatttattaaaaaataaatta
gagaatggttcattattggaaaagacacaagctattaatatttatttcacactttcaagt
gcaaaagcaatcgattcaaaaaccgtttcaataattgatccattattgatacaagctgtt
aattcaatggtttcactcatggacgaagatggtactttcaagtctgtcagtaccgatgat
gaaggtaaccttcaaaatacagccgctgcatactttgcattggctcgtttatctcatcgt
ttaaagagtaatgaagtcgataagttggtagcaaaagttgtaaacaaagttgacactgtt
ttagcatccgccgacgaaaccaccgacagtctatactttaacgacctttcaaccacttcc
tcactcttacatggtttactctcattggcaagcgttaacgataaggtggccgatgtcatt
agtaacaagcaaatcaatcaaatctctgaataccttttaagacaaaagaatgttgaatcc
ctctctgatgcttaccatttaatcgttgcactcaagagatgtcaaaagaattcaatctct
caaccaatctctttggctttagttaaatcaatttactcaccatccggtttgaatgatatt
cgtgttcgtgtcaccgatattttcgatcaaccaatcgaagcatcaattgtgatcaacaag
gttgtctcatcaaagaatccacgttcaacaccaatactctctggtaaggaaatgaaattc
caatcctctgataacagctttgtcgccgatctctccaatgagaaccttaaattgggttca
tacaatttcgaattcaaagttcaaccagtcgataccgatagttacaaatctatcaccaac
attcaaatcattacaatcactggtgccgttaccgtcaacgatatgaaattatcatatgca
ccaaaatccgatcaattaggttctccaaagactaccaatgaagttcaatttggtcaaaaa
ttaccattaattgaaatcccatcaaataatatcgctcgtatcttctttagaatcgcatct
gaagctcaaccatatcaagctcaacaagttggtattcgtttctattcaccagctagagaa
gccgtagttccagcaacttactctgctgatgcctactcttacaccttcaccaataaagat
gcttgcaagattttaggttgtcaatctggaaattatcaattggatttaatcattggtgat
caatcaatcactccattacaatggaatttcggtgaaattaatttgaaattcaatcaatca
accattccaaccaatcgttatccagaacaactcccaatctctcacaactttagagtagct
gaaaagagaccaccacaatctatctcaagtttattcactctcttggtcttatcaccaatc
gccatctttgtcattggtctcttattcgttggtaccaatcttggtagattcccaactggt
atgggtttcatttacaccattggtttccttggttgtatctctgcaactggtctcttaatt
gtaaactattggttacactccacaatggatgttaccctcaaaaatttagctttattaatg
attccattagttttctttggtcataaatcaatgagttattattcaaatctttcttcttca
aatattaaaaaagattaa
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