KEGG   Desulfitobacterium dichloroeliminans: Desdi_3413
Entry
Desdi_3413        CDS       T02390                                 
Name
(GenBank) superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
  KO
K02240  competence protein ComFA
Organism
ddl  Desulfitobacterium dichloroeliminans
Brite
KEGG Orthology (KO) [BR:ddl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ddl02044]
    Desdi_3413
Secretion system [BR:ddl02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   Desdi_3413
SSDB
Motif
Pfam: Helicase_C DEAD ResIII AAA_22 AAA_30
Other DBs
NCBI-ProteinID: AGA70799
UniProt: L0FAF3
LinkDB
Position
complement(3507137..3508903)
AA seq 588 aa
MFYILLSESVELHITPLREMSFLQEKAEVLLPGLPFGFALSLLDKMSNKKNKAEKLTSFW
LRRRKGETKVLKRDRDGLKGELIKILQKKVSISQAWHWEHLESFQFDPEGKIRSRGRDAF
QARMTGRLLAKTDLQRLGKECRIPYSEVLCLCHEQISKGYGEWVPAVIKDDQGWRCQRCG
GTKVEEWTSIYGSTATCTECTVLGAVSSLHALYRSTCLPDIHWPKQHKIVFSPRWELSEA
QKLASQEILKYVQEDSISEAVGREMLLWAACGAGKTEVCFPATAWALEQGRRVLFAAPRQ
DVIHDVAPRLQEDFPDLQISVLTGISPEHFASSPLVLATTHQILRFYQAFDIIYLDEMDA
FPYYGNDALAWGIQQALRPEGKIVYLTATPTAESLGKVRDGKMGLIRIPARHHRRAIPMP
EWRKVSEGLAPERFSHHPILKVWQWLKELVRLGPVLIFVPKISWVNAWVNLLQGEFPEWV
IAGSYSTDPQRQEKIEGLRRRKYHVFVCTSILERGITFPDAQVVVLEADHKLFDERALVQ
MAGRVGRTRENPTGSALFLATRKTPGMEKAMVWIREQNELALAQGLID
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgttctatattctactttcggaatcagtggaattgcatatcactcctctcagagagatg
agcttccttcaggagaaggctgaggtcttgttacctggtcttccctttggttttgcttta
tccttgctcgataaaatgagtaacaaaaaaaacaaagcggagaagttgacgtctttctgg
cttaggcgaagaaaaggagagacaaaggtcctaaaaagagatcgggatgggctcaagggc
gagctgatcaaaattttgcagaaaaaggtaagcatctcccaagcttggcactgggagcat
ttggagagttttcaatttgatcctgaggggaaaattcggtctagaggccgagatgctttt
caagcgaggatgacaggaagactgctagcaaaaaccgatcttcaacggttggggaaggag
tgtcgtattccttattctgaagttttatgcctgtgccatgaacaaattagcaaaggatat
ggggaatgggtccccgcggtcatcaaggatgaccaaggttggagatgccagcgttgcggg
gggacaaaggtagaggaatggacaagcatttatggatcaaccgctacctgcacagaatgc
actgtattaggggcagttagctctcttcatgctctctatcgaagtacatgtctaccggat
atacattggcctaagcagcataagattgtcttctcgccacgttgggagctaagtgaggcc
caaaagctggcttcccaagagattttaaagtatgtccaagaggattcgataagtgaggct
gttgggcgggaaatgttgctctgggcagcctgcggagcaggcaaaactgaggtctgtttt
ccagctaccgcatgggcacttgagcaaggaagaagagtcctgtttgcggctccccgacag
gatgtgatccatgatgtagctcctcgcttgcaagaggattttccggacctgcagataagt
gttttgaccgggatcagtccggagcactttgcttcgtctcccttggtcctagccacgact
catcagatactccgattttatcaggcctttgatataatctatcttgatgagatggatgcc
ttcccctattatggcaacgatgctttggcatggggaattcagcaagccttgcgaccagag
gggaagattgtctatctgaccgccactccgaccgcagaaagtttaggtaaggtacgggat
ggaaagatgggactcattcgcatacccgctcggcatcaccgtcgggctatcccgatgcct
gaatggcggaaggtctccgaggggttggcgccggaaaggtttagtcatcatccgattctg
aaagtatggcagtggctgaaagagttagtgcgtctcggaccagttctcatcttcgtccca
aaaatatcctgggttaatgcatgggttaacctgctgcagggggaattcccagagtgggtc
attgccggaagctatagcactgaccctcaacgacaagagaagattgaaggactgaggaga
aggaaatatcacgtctttgtctgtacctccattctggagcggggaataacatttcctgat
gcacaggttgtggtgttagaagcagatcataaactgtttgatgagagagctctcgtgcag
atggcgggacgggtgggaagaacccgagagaatccgactggcagtgctctcttccttgcc
acgagaaaaacccctgggatggaaaaggcgatggtttggattagggagcaaaatgaatta
gctctggcccagggattaatcgattaa

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