Dickeya dianthicola: DDI_2256
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Entry
DDI_2256 CDS
T05141
Name
(GenBank) Ribosomal RNA small subunit methyltransferas F
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
ddq
Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddq03009
]
DDI_2256
Enzymes [BR:
ddq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
DDI_2256
Ribosome biogenesis [BR:
ddq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DDI_2256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
Methyltransf_23
PCMT
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ATO33424
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All DBs
Position
2293753..2295201
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AA seq
482 aa
AA seq
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MAKPIPASLTPDFLTAMQAIMPAHLSMEAFIDVCQRPLRRSIRVNTLKISVPDFLALVAP
YGWELEAVPWCDEGFWLLNADEEAMRLGNALEHLAGLFYIQEASSMLPVSALLMGDDAPA
RVLDMAAAPGSKTTQIAARLNNQGLIVANEYSASRVKVLHANLHRCGVSNTALTHFDGRV
FGNALPETFDAILLDAPCSGEGVVRKDPAAMSHWSLESIADIAATQRELILSAFHALKPG
GVLIYSTCTLNHQENQQVCRWLMQQFPAACEVESLKDLFPQAHRALTEDGFLHVFPQIYD
SEGFFVARLRKTAAVPPLAAPDYKLGKLPFSPVNHKDAQLIRQSAQRLGLQWSEQQLQLW
QRDDEIWLFPAALQPMLGKMRFSRIGVKLAERFAKGYRWQHEAVVALGHPDSANTYALSA
EQVVDWFRGKDIYPPSPVSHDEILLTWQQTTLGLTKRVGQRLKNTLPRDLVRDGANHVPT
IG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaacctattcccgcgtctctcacccctgactttctgaccgccatgcaggctatc
atgcctgcgcacctgagcatggaggcgttcatcgacgtctgccagcggccgctgcggcgc
agcatccgcgttaacaccttgaaaatcagcgtgcctgattttctcgcgttagtcgcgccc
tacggctgggagctggaagcggtgccctggtgcgatgaaggattctggctgctgaacgcg
gatgaagaagccatgcggctgggcaacgcgctggagcatctggccggcctgttctacatt
caggaagccagctcgatgttgccggtcagcgcgctgttgatgggggatgacgccccggcg
cgggtactggacatggcggccgcgcccggctccaaaaccacccagatagccgcccggctc
aacaatcagggattgattgtcgccaacgaatattccgccagccgggttaaggtgttgcac
gccaacctgcaccgctgcggcgtcagtaataccgccttaacgcattttgacggccgggta
ttcggcaacgccttgccggaaacctttgacgccatcctgctggacgcgccctgctccgga
gaaggcgtggtcagaaaagaccccgcggccatgagtcactggtcgttggagagcatcgcc
gacatcgcggcgacccagcgcgagcttatcctgagcgcattccatgccctgaagccgggc
ggcgtgctgatttattccacctgcaccctgaatcaccaggagaaccagcaggtttgccgc
tggctgatgcagcaattccccgcggcctgtgaggtcgaatcgctgaaggatttgttcccg
caagcgcaccgcgctctcaccgaagacggttttctgcacgttttcccgcagatttacgac
agcgaaggcttttttgtggcgcgcctgcgtaaaaccgccgccgtaccgccgctggcggcg
ccggattacaaactcggcaagctgccgtttagccccgtcaaccacaaggatgcgcaactg
attcgccaaagcgcgcagcggctgggcctacagtggtcggaacagcaattacagttgtgg
cagcgggacgatgaaatctggttgttcccggcggcattgcagccgatgctgggcaaaatg
cgcttctcccgcatcggcgtcaaactggcggaacgctttgccaaagggtatcgctggcag
catgaagccgtggtggcgctgggacatcctgacagcgcaaacacctacgcgctcagtgcg
gagcaggtcgtcgactggtttcgcggcaaagatatctatccgccctcgcccgtcagccac
gacgagattctgctgacctggcaacaaaccacgctgggattgaccaaacgtgtcggccag
cgcctgaaaaacaccctgcctcgcgatctggttcgcgatggcgccaaccatgttcccacc
atcggctaa
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