Denitrobacterium detoxificans: AAY81_04540
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Entry
AAY81_04540 CDS
T04382
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ddt
Denitrobacterium detoxificans
Pathway
ddt03030
DNA replication
ddt03410
Base excision repair
ddt03420
Nucleotide excision repair
ddt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAY81_04540
03410 Base excision repair
AAY81_04540
03420 Nucleotide excision repair
AAY81_04540
03440 Homologous recombination
AAY81_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddt03032
]
AAY81_04540
03400 DNA repair and recombination proteins [BR:
ddt03400
]
AAY81_04540
Enzymes [BR:
ddt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAY81_04540
DNA replication proteins [BR:
ddt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AAY81_04540
DNA repair and recombination proteins [BR:
ddt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AAY81_04540
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAY81_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ANE22510
UniProt:
A0A172RXQ9
LinkDB
All DBs
Position
1090469..1093123
Genome browser
AA seq
884 aa
AA seq
DB search
MPKKIAVIDGNSLMHRAYHAVPPTMNAPDGTPTNAVFGFLSMFFKFIEVAAPDAVVCAFD
VGKPKFRIEALEQYKAQRPPMDDELRVQFPLVEEILESMNIPVVKVPGWEGDDILGTISA
RADALGYDSLLVTGDKDACQLASEHTHIVNTKKGISDVVIYDPAGVQEKYGVTPEQIPDY
LGFMGDSADNIPGVPGIGPKSASKLLQQFGSMEGVYENLDKLKGKQLENLTNNRDAAFLS
RDVAIIKRDLDFELDLDAVSFPSYTAESVSEAFDKLRLKAHLGKALALIGGQAVQHNVEI
PWRDYLTGDDAKVFADEVLDDGVAHDADDVVGIAFLKSDQGSIFGDDLMLAVSTAKACAL
LEGSQAQAMLSHAVLVSGVIPVAVYDAKAVAGEVYPADTAEEKLIHTHDLFDMKLFDVSL
AAYVLDSSARDYTPAHLAERYLGGALPQGSSDADELVIQAAAIRLLSGELSKRMEEDCVY
DVYSDIDAPLVPVLAHMERVGAAIDVDHLRALGEKTQGDLDALVAQIYELAGEEFNVDSP
KQVGHILFEVIGLKPKKKTSRGYSTDAKVLSELANEHELPGLILKYRELAKIKGTYIDAL
PKMRRGDGRLHTSFNQTVTTTGRLSSSDPNLQNIPVRTAFGRHIRECFVPLTEGHVFMSA
DYSQIELRLLAHLSGDEHLVAAFNSGADFHAATASHVFGVPIEEVTPELRSRAKAVNFGI
VYGQQAYGLSQTLKVSFAEAQQMIDQYFEAYPGVRSYLDGVVEFAREHGYAQTMFGRKRH
IPEINVRNAQQRSFAERRAMNHPMQGSAADIIKLAMVQAENRLRHEFPNAKLMIQVHDEL
DLSVPADQVEPVSELLREVMENVVELSVPLIVDVQSGENWAQAH
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaaaatagctgtcatcgacggaaactccctgatgcatcgcgcgtatcatgcg
gtgccgccaaccatgaacgcgcccgacggcactcctaccaatgccgtattcggcttcctt
tccatgttcttcaagttcattgaggttgccgcacccgacgcggttgtctgcgcgtttgac
gtgggtaagccgaagtttcgcatcgaggcgctcgagcagtacaaggcgcagcgtcctccc
atggatgacgaactgcgcgttcagttcccgctcgtcgaggaaatcttggagagcatgaac
attcccgtggtgaaggttcccggttgggaaggcgacgacatcctgggcaccatttccgcc
cgcgccgatgccctcggatacgattctctcctggttacgggcgataaggatgcgtgtcag
cttgccagtgaacatacgcacatcgtaaatacgaagaagggcatttccgatgtcgtgatc
tacgacccggcgggcgttcaggaaaagtacggcgtaaccccggagcagattcccgattat
ctggggttcatgggcgattccgccgataacatcccaggcgtacctggtattggcccgaag
agcgcctccaagcttctgcaacagtttggcagcatggagggcgtgtacgaaaacctcgac
aagctaaagggcaagcagctcgagaaccttaccaataatcgtgatgcggccttcctgtcg
cgcgatgtcgccatcatcaagcgcgacctcgacttcgagctcgatcttgatgccgtttcg
ttcccctcgtataccgccgaatccgtttcggaggcgttcgacaagctgcgcttgaaggcc
catctgggcaaggcgcttgcgcttattggcggccaggcggttcagcataacgtcgagatt
ccctggcgagattaccttacgggggacgacgccaaggtgtttgccgacgaggttctcgac
gacggcgtggcacacgacgcagacgacgttgtgggcattgccttcctcaagagcgatcag
ggttccatctttggcgacgatcttatgctggccgtttccacggcgaaggcatgcgcgctg
ttggaagggtcgcaggctcaggctatgttgtctcatgcggttttggtttcgggcgtcatt
cccgttgccgtatacgatgccaaggcagttgcgggcgaagtgtatcccgccgatactgcc
gaagagaagctcattcatacgcacgacctgttcgatatgaagctgttcgacgtgagtctt
gccgcttacgtgctcgattcctctgcgcgcgattacacgccggcgcatctagccgagcgc
tacttgggcggcgcgttgcctcagggctcttccgacgctgatgagctggtcattcaggcg
gctgccattcgcctgctttccggcgagctcagcaagcgcatggaagaagactgcgtctat
gacgtctacagcgatatcgatgctccgctcgttcccgtgcttgcgcatatggaacgcgtg
ggtgcggctatcgacgtcgatcatcttcgcgcactgggcgaaaagactcagggcgatttg
gatgcactcgttgcgcaaatctacgagctagcaggcgaggagttcaacgtcgattctccc
aagcaggtaggccatattttgttcgaggtcattggcctgaagccgaagaagaagacctcg
cgtggctattccaccgacgccaaggtgctttccgagcttgcaaacgagcatgagcttccg
ggtctcatcctgaagtaccgcgagcttgcgaagatcaagggcacgtacatcgacgcgctg
ccgaagatgcgtcgcggcgacggtcgccttcatacttcgttcaaccagacggttaccact
acgggccgtctgagctcgagcgaccccaacctgcagaacatccccgtgcgcacggcgttt
ggccgccatattcgcgaatgcttcgtgccgcttaccgagggccacgtgttcatgtctgcg
gactattcgcaaatcgagcttcgtctgcttgcgcatctttcgggcgacgagcatttggtt
gctgcattcaattccggtgccgacttccatgctgctactgcttcgcatgtattcggcgta
cccatcgaagaagtcactcccgaactgcgcagtcgcgcaaaggccgtgaacttcggcatc
gtgtatggccagcaggcatatggcctctcgcagaccctgaaggtttcctttgccgaggcc
cagcaaatgatcgaccagtacttcgaggcatatccgggcgttcgttcgtaccttgatggc
gttgtggaattcgctcgcgagcatggctatgctcagaccatgttcgggcgcaagcgccat
attcccgaaattaacgtgcgcaacgcgcagcagcgttcgtttgcggagcgcagggctatg
aaccatcccatgcagggcagtgcggccgatatcatcaagcttgccatggtccaagctgaa
aaccgcctgcgtcacgagttccccaatgcgaagctcatgattcaggtgcacgacgaactc
gacttgtccgttcctgccgatcaggtggagccggtaagcgagctgttgcgcgaagtcatg
gagaacgtggttgaactttcggtgcctctcattgtcgatgtgcagtcgggcgaaaactgg
gcgcaggctcactag
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