Deefgea piscis: HQN60_01040
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Entry
HQN60_01040 CDS
T06622
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dee
Deefgea piscis
Pathway
dee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HQN60_01040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dee03400
]
HQN60_01040
Enzymes [BR:
dee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQN60_01040
DNA repair and recombination proteins [BR:
dee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HQN60_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
PriA_CRR
Helicase_C
HypA
AAA_30
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
QKJ65432
UniProt:
A0A6M8SK26
LinkDB
All DBs
Position
complement(199538..201718)
Genome browser
AA seq
726 aa
AA seq
DB search
MIKREKVTAFALVALDVPLKKLFAYALTGPIPAVGSRVLVPFGPRRISGVVLELRDDAAD
FKGTPKAILAVLDDLPPLPAETLQLCQFVAHYYHYPIGAVIAAALPKVFRSPTVFREPAP
SLVYFAEDVAELLQQIPSRAPAQRRVAAHLAVPHTPAALRRLHDSAWRWVKVWHEQGWLQ
SALEAKVLAKASDNLALNAEQSQVLTELTGARGFAPFLLYGITGSGKTEVYLQTIAQVLA
RGLQVLVLIPEINLTPQLEGRFRARFPGVPMAALHSGLNDTERAVNWLSALRGEAKIVLG
TRLAVFTPLPQLGMIIVDEEHDPSFKQQEGLRYSARDVAVYRARQAKVPIVLGSATPSIE
SWANAKAKRYRMLTLSERAVPGAVLPKITLLPVKNVGLVDGLHVMALAAMHAALDRGEQV
LIFLNRRGFSPVLQCGECGWMACCTHCSARLVLHLKERRLRCHHCGYEQAITPACPDCGN
HDLKPVGQGTQRMEESLPLHFPGKKILRIDRDSTSKKGELDAALAQVHSGEVDIVIGTQM
LAKGHDFDLLTTVVVLNADTGLYSVDFRAEERLFALLTQVAGRAGRRELPGEVFIQTAFS
DHPFYHQLLARDFAPFADRTLHERQMMLLPPANAWALFRADAPELEQALSALAQIRACIA
PEPHLLLNQPVAATMLKKAGVERAQLLIAAQSKVQLQAVLDEALPTIAALKLPKVRWSLD
VDPIEV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgataaagagagagaaagtgactgcttttgccttggttgcacttgacgtaccgcttaaa
aagttgttcgcttatgccttaactggccctatacctgcagtcggctcgcgggtgctggta
ccgtttggtccacgccgcatttcgggcgtggtacttgaattacgcgacgatgcggcagat
tttaaagggacgcccaaagccattttggcggttttggatgatttaccgccattgcctgcc
gaaaccttgcagttgtgtcagtttgttgcacattactatcactatcccattggcgcggtg
attgccgctgcgctgccgaaggtctttcgtagtccaaccgtgtttcgcgagccggcgcca
agcttggtgtattttgccgaggatgttgccgagttattgcagcaaattccctcaagagcg
ccagcgcagcgccgcgtggctgcacatttggcggtgccacatacgcctgccgcactgcgc
cgtctgcatgacagcgcttggcgttgggttaaggtatggcacgagcaaggttggttgcaa
tcggcgctagaggccaaagtgctggccaaggccagtgacaacttggcgctcaatgcagag
caaagccaagtgctgacggagctgactggggcgcgtggttttgcgccgtttttgctgtat
ggcattaccggtagcggcaaaaccgaagtgtatttgcaaaccattgcgcaagtgttggcg
cgaggtctgcaagttttagtgttgattcccgagattaatctgacgccgcaattagaaggg
cgctttcgtgcgcgctttccgggtgtgccgatggcggcactgcatagtggcttgaatgat
actgagcgcgcggtcaattggctgtcggcgctacgtggcgaagctaaaattgtcttgggt
acgcgtttggcagtgtttacgccgttgccgcagctgggcatgattattgtcgatgaagag
catgatccttcattcaagcaacaagaaggtctgcgctattcggcgcgtgatgtggcggtg
tatcgggctaggcaggccaaggtgccgattgtgctcggctctgccacaccgagcattgaa
agctgggccaatgccaaagctaagcgttatcgcatgctcactttgtctgagcgcgcagtg
ccgggcgcggtcttgcccaaaatcactttattaccggttaaaaatgtcgggctcgtcgat
ggcttgcatgtgatggcactggctgcgatgcatgccgcgctcgatcgcggtgagcaggta
ctgatctttttaaatcggcgtggtttttctcctgttttgcagtgcggtgaatgtggctgg
atggcctgttgtacccattgctcggcgcgcttggtgttgcatttaaaagagcgccgtttg
cgctgccatcattgtggttatgaacaggcgattacgccggcttgccctgattgtggcaat
catgatttaaaaccggttgggcagggcacgcagcggatggaagagtctttgccactgcat
tttccaggcaaaaaaatcttgcgaattgatcgcgattcaaccagtaaaaaaggcgaattg
gatgcggcgttagcgcaagtgcattccggcgaggttgatattgtgattggcacccaaatg
ctcgccaaaggccatgattttgatttgctcacaacggtggtcgtgctcaatgccgatacg
ggcttatatagcgtcgattttcgcgctgaagagcgtttatttgcattgttaacgcaagtg
gccgggcgagctgggcggcgtgagctgcctggcgaagtatttatccaaactgcgttttcc
gatcatccgttttatcatcaattgttagcgcgcgattttgcgccatttgccgatcgcact
ttgcatgagcggcaaatgatgttgttgccgccagcgaatgcttgggctttgtttcgtgcc
gacgcccccgagttagagcaagcattgtcggcattggcgcaaattcgtgcctgtattgca
cctgagccccatttattgctcaatcagccggtggcggcgacgatgctcaaaaaggcgggc
gtagagcgggcgcaattattgatcgccgcgcaatcaaaggtgcaattacaggcggtgctc
gatgaggctttgccgacgattgccgcgttgaaactgcctaaagtgcgttggagtttggat
gttgacccgattgaagtatag
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