Devosia sp. I507: C4375_18150
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Entry
C4375_18150 CDS
T05346
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
dei
Devosia sp. I507
Pathway
dei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4375_18150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dei03019
]
C4375_18150
Messenger RNA biogenesis [BR:
dei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C4375_18150
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Paralog
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GFIT
Motif
Pfam:
Lactamase_B_2
RNase_J_C
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
AVF05428
UniProt:
A0A2L1SAI0
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Position
complement(3709437..3711110)
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AA seq
557 aa
AA seq
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MAKNQRDELVFVPLGGVGEIGMNMAAYGFGPAHRRKWIVVDCGVSFGGPDLPGIELIMAN
PEFLEENADDVLALILTHSHEDHYGAVLDLWPVFDKPVYATPFTAAMLAAKRAGDGIVEN
VDVTIMQPGKPFDVGPFTIEPINVAHSIPESNAILITTPIGRALHTGDWKLDPTPVISAP
TNFDRLKKIGEDTSTPLALICDSTNATKEGESPSEQEVGDNLAKLIADAPHRVAVTTFAS
NVGRVVSIVRAAHKAGREVVLSGRSLHRIMGIARELGMLEGLPTLHDQDAYKSIPRDKCV
LICTGSQGEARAAIARIARGDHPVIDLNAGDRMIFSSWAIPGNEREVIDIQNLLIDKGVE
LITANDALVHVTGHPRRGELQKLYSWVKPEVLVPVHGESVHLQAHAKLGREEGIPNVCEA
RNGDMVRLFPEPMAYPAEVRTGELYLDGLVLCTPEESGVKGRRRLSFGGMVIVSLCVNGG
GQVVSGPDLVVEGLPETDEESVTDLIEDTITGVIKSMPAKRRSDTEVLNSALFKAIRNEV
NAFWGRKPNVSVFVHRV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaccaaagggatgaactcgtctttgtgccgcttggcggcgttggcgaaatc
ggcatgaacatggccgcctatggcttcggcccagcccatcgccgcaagtggatcgtggtc
gattgcggggtcagcttcggcggtcccgatctgcccggcatcgaactgatcatggccaat
cccgaatttctcgaggagaacgccgacgatgtgctggcgctgatcctcacccacagccac
gaagaccattacggcgccgtgctcgacctctggccggtctttgacaagccggtctatgcg
accccctttacggccgccatgctcgccgccaagcgggcaggggatgggatcgttgaaaat
gtcgatgtgaccatcatgcagccgggcaaaccgttcgacgtcggcccgttcaccatcgag
ccgatcaatgttgcgcactcgatcccggaatcgaacgccatcctgatcaccacgccaatt
ggccgcgctctgcataccggcgactggaagctcgatccgaccccggtgatcagcgcacca
accaattttgatcgcctcaagaagattggcgaggacacctctacaccgttggccctgatc
tgcgattcaaccaacgccaccaaggaaggcgaaagcccgagcgagcaggaagtcggcgac
aatctcgccaagctcatcgccgatgcaccgcaccgcgtcgccgtcaccaccttcgcttca
aatgtcggacgcgtggtctccatcgttcgcgctgcccacaaggccggccgcgaagtggtc
ctctcgggtcgctcgctgcaccgcatcatgggcattgcccgcgaactgggcatgctcgaa
ggcctgccgacgctgcacgaccaggatgcctataagtccattccgcgcgacaagtgtgtg
ctgatctgtaccggtagccagggcgaggcccgtgccgccattgcccgtatcgcccgcggc
gatcatccggtgatcgacctcaatgccggcgaccgcatgatcttctcgtcctgggccatt
ccgggcaatgagcgcgaagtcatcgacattcagaacctgctgatcgacaagggcgtcgaa
ctcatcaccgccaatgacgcacttgttcatgtcaccggccacccccggcgcggcgaactg
caaaagctctattcctgggtcaagcccgaggttctggtgcctgttcacggcgaatcggta
catctgcaggcgcacgccaagctcggccgcgaagaaggcattcccaatgtctgcgaggcc
cgcaatggcgatatggtccggctcttccccgagcccatggcctatccggccgaagtgcgc
accggcgaactctatctcgatggcctggtgctctgcacccccgaggaaagcggcgtaaag
ggccgccgccgcctgtcctttggcggcatggtcattgtcagcctctgcgtcaatggcggt
ggccaggtcgtctccggccccgatctggtcgtcgaaggcctgcccgaaaccgacgaagaa
tcggtcaccgacctcatcgaagacaccatcaccggcgtcatcaagtcgatgcccgccaag
cgccgcagcgacaccgaagtgctcaactccgccctgttcaaggccatccgcaacgaggtc
aacgccttctggggccgcaagcccaacgtctcggtcttcgtgcatcgggtctga
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