Deinococcus sp. AJ005: DAAJ005_00605
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Entry
DAAJ005_00605 CDS
T06226
Name
(GenBank) efflux RND transporter permease subunit
Organism
dein
Deinococcus sp. AJ005
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
QFP75099
UniProt:
A0A5J6YQI5
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Position
p380k:complement(40909..44328)
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AA seq
1139 aa
AA seq
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MSTHESGDLNAPRGTLPDGTPEPVINPFVRFSVRNYVFSIGIFVLVALLGLVSVFRLGVE
LLPNFEVPILAVSTTYAGANPDQVDREVSRRIEDAVSTLAGVVDINTTSVSNQSAVVITF
ADSTDIDSAANSVSQAVAAIRGSLPNGADAPVVQKFDPNATPILSLALLGGSAKPDDVTS
YAEDTLVPRLERVEGVADVRLSGGPERKIQVLLDPTRLQSYNLTPARVTGAISGSALDLP
AGTLTQGGNTTGFSTRNTPRSAADVGRIIVDPANGLRVADVASVRDGSASPTSFARVNGQ
PAVLLSVRKASGTNSVAVTDNVLAAMKAQPLPQGYSLKLANDTTRETRATVSDTFKEFLI
AVAAVGLICLLFLGRLNTVFSVILAIPISISAAPLLFGLLGFTFNIISLLAIIVAIGIVV
DDSIVVAENVQRYRDMGYGQVRSVLLGASEVFSAVTAASFSLLAVLIPLSFFPGILGQFF
SQFGLGIAAAITLSWLESLLFLTVRLAYTAEARSVSWAELPPIVARLPELFRRTLAGVKT
VPGVLALILGGTVTGLALSGTGLPLPVKLILAALLAPVVWTLVRYVVTVLYAFLEALTGT
LHGVTIKGVTGVARAYARSLGNALKRPWIVMLVALAFMGSVVLIAPKLGFAFVPQTDSGI
LNVDLTLPVGTDLATTNAVTRQIEDRLLARKEVRLVQTSVGSGSLVGGNSANASSLTLTL
IPKEERQGLDLLSAEYRTLLAPVVANRPGAELTVASQQTGPGGSADMTLALTAPNQALLL
ERNREVVRLLRKDPNIRTVKSSLSATTQERTFIPDPNRLSGTGLSASDVAQALRTYNDGS
VAGSVRDGDQSVDIVVRLDPSLIRDEQSLLSQTVYSPALNANLPLSGLGTFQVAQAPATL
SRLNKAYTATLDINLKQGGPNPFAYQAVLEKRVGDAGLLKDSVTLGNASAFGSSGLTGDL
VFFGPIIMISSILLTYLVLGSQFNSFRYPIYLLLPVPIAIVGALWTLGLFGVNLDVITVL
GMVVLLGLSTKNSILYLEFVTERARSLPLREALIEAAELRFRPILMTTLTVLVISIPLIL
GQGDGAEFRRGLGIVILGGVVTSTLLTFYVVPTVFWQFERRRLKPDAPVQMGGTPVPGD
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccacgaatccggtgacctgaatgctccacgcggcacgctgcccgacggcacg
ccggagccggtgatcaaccccttcgtgcgcttcagcgtccgcaactatgtcttttccatc
ggcattttcgtgctggtggcgctgctggggctggtctcggtgttccggctgggcgtggaa
ctgctgcccaatttcgaggtgccaatcctggcggtcagcaccacctacgcgggcgcgaac
cccgatcaggtggaccgcgaggtcagccgccgcatcgaggacgcggtcagcaccctggcc
ggagtggtggacatcaacaccacctccgtgagcaaccagtcggcggttgttatcaccttt
gccgacagcaccgacatcgactcggcagccaacagcgtgtcgcaggcggtggccgccatc
cggggttccctgcccaacggcgcggacgccccggtggttcagaaattcgatcccaacgcc
accccgatcctgtcgctggccctgctgggtggcagcgccaaacccgacgacgtgacttcc
tacgccgaggacaccctggtgccccggctggaacgcgttgagggcgtggccgacgtgcgg
ctgtcgggtgggccggaacgcaagatccaggtgctgctggaccccacccgcctgcaaagc
tacaacctgacgcccgcgcgcgtcaccggggccatcagcggctcggcgctggacctgccc
gccggtacgctgacgcagggtggcaacaccacgggatttagcacccgcaacaccccgcgc
agcgccgctgatgtgggccgcatcatcgtcgatccggccaacgggctgcgggtggcggac
gtggccagcgtgcgtgacggcagcgcctcacctacctcattcgcgcgggtcaacggtcag
cctgccgtgctgctctcggtgcgaaaggcctcgggaaccaattctgtggccgtgaccgac
aacgtgctggccgccatgaaagcccagccgctgccccagggatacagcctcaagctggcc
aacgacaccacccgtgagacgcgcgccaccgtttcggacaccttcaaggaattcttgatc
gcggtggccgccgtgggcctgatctgcctgctgttcctgggccgcctgaacaccgtgttt
tcggtgatcctggcgattccgatctcgatcagcgctgcgcccctgctgttcgggctgctg
ggcttcaccttcaacatcatctcgctgctggcgatcatcgtggccatcggcatcgtggtg
gacgattccatcgtggtggccgagaacgtgcagcgttaccgcgacatgggctacggccag
gtccgcagcgtgctgctgggggccagcgaggtcttctcagcggtgaccgccgcgtcgttc
tcgctgctggccgtgctgatcccgctgagcttcttccccggcatcctgggccagttcttc
agccagttcgggctgggcatcgccgccgccattacgctgtcgtggctggaaagcctgctg
ttcctgaccgtgcggctggcctacaccgccgaggcccgcagcgtgagctgggccgagctg
ccccccatcgtggcccgcctgcccgagctgttccggcgcacgctggccggagtcaaaaca
gtgcccggcgtcctggccctgatcctgggcggcacggtcacggggctggccctctcgggc
acgggcctccccctgcccgtcaaattgatcctggccgccctgctggcccccgtcgtctgg
acgctggtgcgctatgtcgtcaccgtgctgtacgccttcctggaagcgctgaccggcacc
ctgcacggcgtcaccatcaaaggcgtgacgggcgtggcccgcgcctatgcccgcagcctg
gggaacgccctcaagcggccctggatcgtgatgctggtggccctggccttcatgggcagc
gtcgtgctgatcgcgccgaaactgggcttcgccttcgtgccgcagaccgacagcggcatc
ctgaacgtggacctgacgctgccggtgggcaccgatctggccaccaccaacgccgtgacc
cgccagatcgaggaccgcttgctggcccgcaaggaggtccggctggtacagaccagcgtg
ggcagcggcagtctggtgggcggcaacagcgccaacgcctccagcctgaccctgaccctg
attcccaaggaggagcgccagggactggacctgctgagcgccgagtaccgcaccctgctg
gcccccgtggtggcgaaccggcccggcgcggagctgacggtggcctcccagcagaccgga
cccggcggcagcgccgacatgacgctggcactgaccgcccccaatcaggcgctgctgctg
gagcgcaaccgggaggtcgtgcgtctgctccgcaaagatcccaacatccgcacggtcaag
agcagcctgagcgccaccacccaggaacgcaccttcattcccgatcccaaccggctgtcc
ggcaccggcctgagcgccagtgacgtggcccaggcgctacggacctataacgatggctcg
gtggcgggcagcgtccgcgacggcgatcagagtgtggacatcgtggtgcggctggacccc
tcgctgatccgcgacgagcagagcctgctgtcgcagacggtctactcgcccgcgctgaac
gccaacctgcccctcagtgggctgggcacgtttcaggtggcgcaggccccggccaccctg
agccgcctgaacaaggcgtacaccgccacgctggacatcaacctcaagcagggcggcccc
aatccgttcgcctatcaggcagtgctggaaaaacgtgtgggcgacgcgggactgctgaaa
gacagcgtcaccctgggcaacgccagcgccttcggcagctcgggcctgacgggcgatctg
gtgttcttcggaccgatcatcatgatcagttcgatcctgctgacctatctggtgctgggc
agccagttcaactcgttccgctaccccatctacctgctgctgcccgtgcccatcgccatc
gtgggcgcactgtggacgctgggcctgttcggcgtgaatctggacgtgatcacggtgctg
gggatggtggtcctgctgggcctgtccaccaagaattccatcctgtatctggaattcgtg
accgagcgcgcccgcagcctgccgctgagggaggcgctgatcgaggctgccgaactgcgc
ttccgcccgattctcatgaccaccctgaccgtgttggtgatcagtattccgctgatcctg
ggccagggcgacggcgcggagttccgccggggcctgggcatcgtgatcctgggcggcgtg
gtgaccagtactttgctgactttctacgtagtgcccaccgtgttctggcagttcgagcgc
cgccgcctgaagcctgacgctcccgtgcagatgggcggcacccccgtccccggcgactga
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