Desulfoluna limicola: DSLASN_20980
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Entry
DSLASN_20980 CDS
T07859
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dek
Desulfoluna limicola
Pathway
dek00521
Streptomycin biosynthesis
dek00523
Polyketide sugar unit biosynthesis
dek00541
O-Antigen nucleotide sugar biosynthesis
dek01100
Metabolic pathways
dek01110
Biosynthesis of secondary metabolites
dek01250
Biosynthesis of nucleotide sugars
Module
dek_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DSLASN_20980 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DSLASN_20980 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DSLASN_20980 (rfbC)
Enzymes [BR:
dek01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DSLASN_20980 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BCS96466
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All DBs
Position
complement(2626836..2627408)
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AA seq
190 aa
AA seq
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MKILSTSIEDVKIVEPKRFGDQRGYFFESWHRAKYKEAGITSSFVQDNCSMSRYGTIRGL
HFQLVHPQAKLVQVLKGSVYDVAVDIRVGSPTFGQWVGVELSEENGRQLYIPEGFAHGFC
VASEEAVFSYKCSDYYMPEDEGGILWSDPGIGIEWPNVESVLSDKDQVYPCLADIEPSRL
PKYSGSGGGA
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgagtacatccatagaggacgtgaagattgttgagcccaagcggtttggg
gaccaaagaggctatttttttgaatcctggcatcgggcgaagtacaaagaggcgggcatc
acatccagtttcgtccaagacaattgctccatgtctcgctatggcaccattcgcgggctg
cactttcaattggtccacccccaggccaagctggttcaggttctgaaaggttctgtttat
gatgtggccgttgatattcgagtagggtcgcctacctttggccagtgggtgggtgtagag
ctgtcagaagagaacggccgtcaactctatatccccgaaggttttgcccacggcttttgc
gtcgcgagcgaagaggcggtcttctcctacaagtgcagcgattattacatgccggaagat
gaaggggggatcctttggtcggatccgggtatcggtatcgagtggccgaatgttgaatcg
gttctatccgataaagatcaggtttatccttgcctggccgatattgagccgtcacgcctt
cctaaatatagcggttcgggaggtggggcgtga
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