Desulfoluna limicola: DSLASN_27590
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Entry
DSLASN_27590 CDS
T07859
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dek
Desulfoluna limicola
Pathway
dek03030
DNA replication
dek03430
Mismatch repair
dek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSLASN_27590
03430 Mismatch repair
DSLASN_27590
03440 Homologous recombination
DSLASN_27590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dek03032
]
DSLASN_27590
03400 DNA repair and recombination proteins [BR:
dek03400
]
DSLASN_27590
Enzymes [BR:
dek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSLASN_27590
DNA replication proteins [BR:
dek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSLASN_27590
DNA repair and recombination proteins [BR:
dek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSLASN_27590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_5
RuvB_N
AAA_22
AAA_30
TIP49
AAA_19
AAA_18
AAA_16
nSTAND3
TsaE
AAA_28
Mg_chelatase
AAA_14
Rad17
Sigma54_activat
PIF1
AAA_2
RNA_helicase
APS_kinase
DNA_pol3_delta_C
AAA_7
T2SSE
Cytidylate_kin
Thymidylate_kin
SKI
Motif
Other DBs
NCBI-ProteinID:
BCS97127
LinkDB
All DBs
Position
complement(3473852..3475627)
Genome browser
AA seq
591 aa
AA seq
DB search
MGQSHVTTTLSHAISADRVAHAILFSGPRGTGKTTVARILAKAMNCSGRRETGSPHPCNS
CRSCREITQGSSADVFEIDGASNNSVEQVRELRSNVSYMPVYSPFKIYIIDEVHMLSMAA
FNALLKTLEEPPPHVLFMFATTEVHKIPVTILSRCQRHDLRRVSHQDLKGHLEKLCGLEG
VTVPNESLDLITVEAGGSVRDSLSILDQIIGSAVDGSVTHESVLTTLGAVEKSDVLALVD
ALIRRDGGAALTAVNRFYTQGNDLRRLFSSLTQTLRNLLVMEVAGPGVLDLPEGEMRALG
AMAQASTRGFLTKSLEVLLAEEPAVRYAAAPKMAMELALIKILQVPDALSIDTLIRKIDT
LQKSGGGAVPPTVRPLNGSGVSETREDYTAAPQAQTVPASQPAPSAAPAAPAAPVVPVGP
EPVIPPQPPVPAEPPREVVAQPAPVATEVEKKAMPSWNPSDTLEMAWSKFLEALRKNRPH
MAPHLAKSALKKVAGKSIEIEITASRFSVARLNNGKKLELEEEVRAWFGPEMDVTLHTII
AGEEAPAGARQGNDRLIKEAKDHPVIHEAIRVFGGKVDVNIIKEEDHEKHG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgggccagtcccatgtcaccaccacactgtcccacgccatttccgccgatcgtgtcgcc
catgccattctcttttccggccctcgtggtacaggaaaaacaaccgtggcgcgtattctc
gccaaggccatgaactgttcaggcaggcgggaaaccggctccccacacccttgcaacagc
tgccgctcctgccgggagattacacagggcagctctgccgatgtctttgaaatcgacggc
gcctccaacaacagcgtggagcaggtccgggagcttcgaagcaacgtcagctacatgcct
gtctacagcccctttaagatctatattatcgacgaggtgcacatgctcagcatggcggca
ttcaacgcactcctcaagaccctggaggagcctccgccccatgtgctgttcatgtttgcc
accaccgaggtgcataagatcccggtgaccatcctgtcacgttgccagcgccatgacttg
cggcgcgtttcgcaccaggacctgaaagggcaccttgaaaagctgtgcgggcttgaaggg
gttaccgttcccaacgagagcctggacctcatcaccgtggaggccgggggatccgttcgg
gactctttgagtatcctcgatcagattatcggcagtgcagtcgatggaagcgtgacccat
gaatcggtgttgacaaccctcggggcggtggagaagagcgacgtccttgcgctggtggat
gccctgatccggcgtgatggaggggcggcgcttacggccgtgaaccggttctatacccag
ggcaacgatttacggcgccttttttcaagcctcacccagacgttgagaaaccttctggtg
atggaggtggcgggtcctggcgtgttggatctgcccgagggcgagatgagagccctgggc
gccatggcccaggcgtccacccgtgggtttcttaccaagtccctggaggtgcttctggca
gaggagccggcggttcggtatgccgccgcacccaaaatggccatggaacttgcccttatc
aagattctccaggtgccggatgccctctccattgataccctgattcgaaagatcgacacc
ctgcagaaatccggggggggcgctgtcccccctacggtgaggcccctgaacggttcgggg
gtctctgaaaccagggaagattataccgccgcccctcaggcccagacggtaccggcgtcc
cagcccgccccatcggcggccccagcggccccagcggcgccggtggtgccggtggggccg
gagccggttataccgccacagcctcctgttccagctgaacctccccgtgaggtcgtggct
cagccggcccctgtggccactgaggtggaaaaaaaggccatgccctcgtggaatccttcg
gatacacttgaaatggcatggtcgaaatttcttgaggcgcttcgaaaaaacaggcctcat
atggccccgcaccttgccaaaagcgccttgaaaaaagtggcgggaaagagtattgagatc
gaaatcaccgcctcccgcttttccgtggcacgcttgaacaacggaaagaaattggagctg
gaagaggaggtccgggcctggttcggacctgaaatggacgtgaccttacacaccatcatt
gccggcgaagaggcccctgccggggcacgccaggggaacgatcgccttatcaaggaggcg
aaagaccaccccgtaatccacgaggccatccgggtcttcgggggcaaggtggatgttaac
atcattaaggaggaagaccatgaaaaacatgggtaa
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