Demequina sp. TMPB413: LGT36_011935
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Entry
LGT36_011935 CDS
T08088
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem03030
DNA replication
dem03430
Mismatch repair
dem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGT36_011935 (dnaN)
03430 Mismatch repair
LGT36_011935 (dnaN)
03440 Homologous recombination
LGT36_011935 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dem03032
]
LGT36_011935 (dnaN)
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_011935 (dnaN)
Enzymes [BR:
dem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGT36_011935 (dnaN)
DNA replication proteins [BR:
dem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGT36_011935 (dnaN)
DNA repair and recombination proteins [BR:
dem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGT36_011935 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
UPU87945
LinkDB
All DBs
Position
complement(2468781..2469908)
Genome browser
AA seq
375 aa
AA seq
DB search
MKFSVDRDVLNDAVAWTARAVPHRPPVPVLAGVLIEADGAGTVKLSSFDYEVSARGEFAA
DVEDGGAVLVSGRLLREISNALPHKPVKFELEGSKVSVTCGASRFSLATMPVDQYPALPT
MPDTSGTVDGAALLAAAQQVQSAASRDETLPILTGVRMEIEGERISLLATDRYRLALREL
TWKPGSPDISAIALVRAKTLTDTAKSLGTGEVQLALSSGQGVDLIGFSAGGLVTTSLLMD
GEYPQVRRLFPDSSAITAIVSTTELIEATRRVALVAERNAAVRLAFSEGEVVLDAGHSDD
AQASEAIEATVEGGDITVAFNPTYLLDGLSALGAPYVRLGFTQDTKPVDFVGLDKPGGTV
ASEFRYLLVPIRIAG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttccgtggatcgggatgtgcttaacgacgctgttgcgtggaccgcgcgcgcc
gtgccgcatcgtccccctgtccccgtgctggctggtgtgctcatcgaggccgatggcgca
ggcaccgtcaagctgtccagtttcgactacgaggtctcagctcgcggcgagttcgcggcc
gacgtcgaggacggcggcgccgtcctggtatccgggcggctgttgcgtgagatctccaac
gccttgcctcacaagccggtcaagttcgaactcgagggctccaaggtctccgtcacgtgc
ggcgcctcgcgcttctcgctcgccaccatgccggttgatcagtaccccgctctgcccacc
atgcccgatacgtctggcaccgtggatggcgcggcgctgctcgctgccgcccagcaggtt
cagtctgccgcgtcacgggacgagaccctcccgatcctcactggcgtgcgcatggagatc
gaaggcgaacggatttccttgctcgccacggaccgctaccgcttggcgcttcgcgaactg
acctggaagccgggctcacccgacatttcagcgatcgcgctcgtgcgcgccaagaccctt
accgacaccgctaagtcgctcggcacaggcgaggtccaactcgcgctgagttccggtcaa
ggggtcgacctcatcggtttcagtgccggcggtttggtcaccacctccttgctcatggac
ggcgagtatccccaggtccgcaggctctttcccgactcctcggcaatcacggccatcgtc
tcgaccaccgagctcatcgaggcgacccgccgcgttgcactcgtggcggagcgcaacgcc
gccgttcgcctcgccttctctgaaggcgaagtagtgcttgatgcgggacacagcgacgac
gcccaggcttccgaggcgatcgaagcgacggtcgagggtggagacatcaccgttgcgttc
aatcccacgtacttgcttgacggtctgagcgctctcggggcgccctacgtgcggctcggt
ttcacgcaagacaccaagccggtggactttgtcggactcgacaagccaggaggcacagtt
gcctccgagttccgctatctcttggtgcccattcgtatcgctggctag
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