Candidatus Doolittlea endobia: MHIR_DE00352
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Entry
MHIR_DE00352 CDS
T04480
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
den
Candidatus Doolittlea endobia
Brite
KEGG Orthology (KO) [BR:
den00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
den03016
]
MHIR_DE00352 (truA)
Enzymes [BR:
den01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MHIR_DE00352 (truA)
Transfer RNA biogenesis [BR:
den03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MHIR_DE00352 (truA)
Prokaryotic type
MHIR_DE00352 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CUX96645
UniProt:
A0A143WSB5
LinkDB
All DBs
Position
I:complement(413723..414556)
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AA seq
277 aa
AA seq
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MPLFRRDVALPVTDNDGTMKLVFGIEYDGSAYYGWQRQKELASVQACLEHAISTVADETV
SIYGAGRTDAGVHATGQVVHFETRSRRSYAAWALGVNANLPADIAVRWVTSVPDDFHARF
SATARRYRYIIYNHPLRSALLSRGLTYCYYPIDAPAMARAGQCLLGENDFTSFRSLQCQS
TSPWRNVHYLHVTRQGYYVVIDIKANAFMHHMVRNIVGSLLIVGSGNQSENWVSDLLAYR
DRTQAGPTARAEGLYLVGIDYPSRFILPTSSSGPLCF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctttcggcgcgatgtagcattgccggtaacagataatgacggaacgatgaag
ctagtgtttgggattgaatatgatggtagcgcttattacggctggcagcgtcagaaagaa
cttgcgagcgtacaagcgtgcctagaacatgcaatatcaactgtcgctgatgaaactgtc
tcgatttatggcgccggccgtaccgacgccggtgtgcatgccacggggcaggtcgttcat
ttcgaaacccgatctcggcgatcatatgccgcttgggcgctcggtgttaatgccaatctg
ccggctgatattgccgtgcgttgggtaacgtcagtgccggacgattttcatgcacgtttc
agcgcgactgctaggcgttaccgttatattatttataatcatcccctgcgctcggcgcta
ctcagtcgcgggttaacctattgttattacccgatcgatgcaccggcgatggcgcgtgca
ggccagtgtttattaggcgaaaacgatttcacatcttttcgttctttgcagtgccaatcg
actagcccttggcgtaacgtgcactatctgcacgttacgcgtcagggatactatgtcgtg
atcgatatcaaagctaatgcttttatgcatcatatggttcgtaatattgtaggcagtcta
ctaatagtaggatctggaaaccagtcagaaaattgggtctccgacttgctagcataccga
gaccgaacacaggctggccccaccgcccgtgcagaggggctgtacttagttgggatagat
tatccgtcgcgtttcatcttgcccacgtcgtcgtcggggccattatgtttttaa
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