Desulfuromonas sp. AOP6: AOP6_0004
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Entry
AOP6_0004 CDS
T08366
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dep
Desulfuromonas sp. AOP6
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dep03032
]
AOP6_0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_0004 (gyrB)
Enzymes [BR:
dep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AOP6_0004 (gyrB)
DNA replication proteins [BR:
dep03032
]
Prokaryotic type
DNA Topoisomerases
AOP6_0004 (gyrB)
DNA repair and recombination proteins [BR:
dep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOP6_0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BCA78217
LinkDB
All DBs
Position
4032..6419
Genome browser
AA seq
795 aa
AA seq
DB search
MTEPNSNVYGADSIKVLEGLSAVRKRPAMYIGSTGPMGLHHLVYEVVDNSIDEALAGFCD
EVTITIHVDGSVTVEDNGRGIPVEMHSTQKKTAAEVVMTVLHAGGKFDNDTYKVSGGLHG
VGVSVVNALSEKLNLEIRRNNKVYKQTYERGVPLAPLLEDGETKKRGTKITFWPDGEIFE
TTEFSFEILSQRLRELAFLNAGVKINISDERNDKSHEFHYEGGIASFVEYLNRAKTPLHP
KPIYFHGQKEGVDLEVAIQYNDSYDEKLFSFANNINTHEGGTHLIGFKAALTRTMNSYAT
ANNLLKNIKTAISGDDLREGMAAVISVKLSNPQFEGQTKTKLGNSEIKGFVETMMNDKLA
IFLEENPQIAKRILEKGIEAARAREAARKARDLTRRKGALDGLALPGKLADCQEKDPALS
EIYLVEGDSAGGSAKQGRDRRYQAILPLKGKILNVEKARFDKMLTSNEIRTLITAMGTGI
GKDDFDISKMRYHRIIIMTDADVDGSHIRTLLLTFFFRQMPAMIERGYLYIAQPPLFKIK
RGKKEIYLKDELSLQDYLLDEGTEGMTIQMEKSGKAIRGKQIIPTLKNIIDYNSLFEKLV
TKGVNKELLKVFVHGKVQNGFSDMDDLTPLAERLKALEPRADFQPISDPPRILFTLGSIR
ARVDQNILEILSSHEYTLLLQAYRKIEDICKDEKAFVSSEGKEEAQIDSVQELLTFFMDR
AKKGQYIQRYKGLGEMNPEQLWETTMDPDKRVLLQVKVEDAVEADEIFTVLMGDQVEPRR
EFIENNALNVSNLDI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccaaattctaatgtttatggagccgacagtataaaagtattggaaggcctt
tcagcagtgcgaaaacgtccagctatgtatattggttcgacaggaccaatgggattacat
catttagtttatgaggtagtcgataattcgatagatgaagcgcttgccggattttgtgat
gaagtaacgattacaattcatgttgatggctcagtaacagttgaggataatggtcgcgga
attcctgtagaaatgcattcaactcagaaaaaaaccgcagcagaagttgttatgaccgtc
cttcatgcaggtggtaaatttgacaatgatacctataaagtatccggtggacttcatgga
gttggtgtttcagttgtaaatgctttatcagaaaaactaaatcttgaaattcgtagaaat
aataaagtttacaaacaaacttatgaaagaggtgtccctttagctccattattagaagat
ggagagacaaaaaaaagaggtacaaaaataacattttggcccgatggagaaatttttgaa
actacagaattttctttcgaaatactttctcaaagactaagggagttggcttttctaaat
gctggggtaaaaataaatattagcgacgaaagaaacgataaatctcatgaatttcattat
gaaggtgggattgcctcttttgtcgaatatttaaacagggctaaaacaccccttcatcca
aaacctatatattttcatggtcaaaaagagggcgtagatcttgaggtggctattcaatat
aacgatagctacgatgaaaagctgtttagctttgcaaataatattaatacccatgaaggt
ggtacgcatcttataggttttaaagccgcattaactcgcaccatgaactcctatgccaca
gccaataatttattaaaaaatataaagactgctatttccggtgatgatttacgtgaaggt
atggctgctgtcatttctgtcaaactctccaatccacagtttgaaggtcaaaccaaaacg
aaacttggaaactcagaaataaaaggtttcgttgaaactatgatgaatgacaaactggct
atttttctggaagaaaatccccaaattgccaaaagaattttggaaaaaggaattgaggct
gcaagagcacgagaggccgccaggaaagccagggatctcacccgcagaaaaggtgctctc
gatggtttggcattgccaggcaaattggctgactgtcaggaaaaagatccagctctcagt
gaaatttatctggtggagggcgacagcgcgggaggaagcgcgaagcagggacgtgaccgt
cgatatcaggctatattgccgttaaaagggaaaattctgaatgtcgagaaagcacgtttc
gataaaatgttgacctccaatgaaatcagaactcttattactgccatgggcactggtatt
ggtaaggatgattttgatatttcaaaaatgcgatatcatcgcataattattatgacagat
gctgatgttgatggttcacacataagaacacttcttttaacttttttcttcaggcagatg
cctgcaatgatagagagaggctatctctatatcgctcagccacctctttttaaaataaaa
agaggcaaaaaagaaatctatcttaaagatgagttgtctttgcaggattaccttctagat
gaaggtactgaagggatgacaattcagatggaaaaaagtggaaaagcgatacgtggaaaa
caaatcattcctaccttgaaaaatattatagattacaactccctttttgaaaagttggtt
accaagggcgtcaataaagagttacttaaagtttttgttcatggaaaagtacagaacggc
ttttctgatatggatgacctaacgcctttggctgaaagactaaaagccttggaaccccgg
gcggattttcaaccaatcagtgacccacctcgaattctatttacacttggcagtatcagg
gcgagggtcgatcagaacattctagagatcctttcctcccatgaatatactctgcttctg
caagcatatcgcaagatcgaagatatatgtaaagatgaaaaagcttttgtttcctctgag
ggaaaagaagaggctcagattgacagcgtgcaggaattactgacattttttatggatcga
gctaaaaaaggacaatatattcagagatataagggattgggagaaatgaacccggagcaa
ctgtgggaaacgaccatggatcctgataagcgcgttttgctacaggtaaaggttgaagat
gcggttgaagctgacgaaatatttacggttctgatgggagaccaggtcgaaccgagaaga
gaatttattgaaaataatgccctgaatgtatcgaatctcgatatttga
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