Devosia sp. H5989: XM25_00925
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Entry
XM25_00925 CDS
T04003
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
deq
Devosia sp. H5989
Pathway
deq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XM25_00925 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deq03019
]
XM25_00925 (groEL)
03110 Chaperones and folding catalysts [BR:
deq03110
]
XM25_00925 (groEL)
03029 Mitochondrial biogenesis [BR:
deq03029
]
XM25_00925 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
deq04147
]
XM25_00925 (groEL)
Enzymes [BR:
deq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XM25_00925 (groEL)
Messenger RNA biogenesis [BR:
deq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XM25_00925 (groEL)
Chaperones and folding catalysts [BR:
deq03110
]
Heat shock proteins
HSP60 / Chaperonin
XM25_00925 (groEL)
Mitochondrial biogenesis [BR:
deq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XM25_00925 (groEL)
Exosome [BR:
deq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XM25_00925 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
XM25_00925 (groEL)
Exosomal proteins of breast cancer cells
XM25_00925 (groEL)
Exosomal proteins of colorectal cancer cells
XM25_00925 (groEL)
Exosomal proteins of bladder cancer cells
XM25_00925 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKR54389
LinkDB
All DBs
Position
complement(178675..180315)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVKFSTDARERMLRGVNTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENLGAQLLRSVASKTNDIAGDGTTTATVLGQAIVVEGVKAVAAGFNPMDLKRGI
DMAVEEVVGSLKAQAKKINSSAEVAQVGTISANGESSIGDQIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNTEKMTAVLEDAVILLHEKKLSNLQTILPLLEAV
VQSQRPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLENVTIDMLGTAKRVEITKENTTIVDGAGAAEDIQGRVAQIKAQIEETTSDY
DKEKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALNATRAAVEEGIVPGGGVALL
RASSNLKVKGANADQDAGIAIVRRALQEPVRQIASNAGAEGSVVVAKILENASVSFGYNA
ATDQYGDLVQLGVIDPVKVVRTALQDAASVASLLITTEALIAELPKEAAPAMPGGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagaagtaaaattctccaccgatgcccgcgagcgcatgctgcgcggcgtc
aacaccctcgccaatgcggtgaaggtgaccctcggccccaagggtcgtaacgtcgttatc
gaaaagtcgttcggcgccccgcgcatcaccaaggacggcgttaccgtcgccaaggaaatc
gaactggaagacaagttcgagaacctgggcgcccagctcctgcgctcggttgcttccaag
accaacgacatcgccggtgacggcactaccacggccaccgttctcggccaggccatcgtc
gtcgaaggcgtcaaggccgtcgccgccggtttcaacccgatggatctgaagcgcggcatc
gacatggccgtcgaggaagtcgtcggcagcctcaaggcccaggccaagaagatcaattct
tcggctgaagtcgcccaggtcggcaccatctcggccaacggcgagtcctcgatcggcgac
cagatcgccgaggccatgcagaaggtcggcaacgagggtgtgatcaccgtcgaggaagcc
aagaccgccgagaccgagctcgaagtcgtcgaaggcatgcagttcgaccgcgggtacctc
tcgccctacttcgtgaccaacaccgagaagatgaccgccgtcctcgaagacgccgtgatc
cttctccacgagaagaagctctcgaacctgcagaccatcctgccgctgctcgaagccgtc
gtgcagtcgcagcgtccgctgctgatcatcgccgaagacatcgaaggcgaggctcttgcc
acgctcgtcgtcaaccgtctgcgcggtggcctcaaggtcgctgccgtcaaggccccgggc
tttggtgaccgccgcaaggccatgctcgaagacatcgccatcctcaccggtggccaggtg
atctccgaagatctcggcatcaagctcgagaacgtgaccatcgacatgctcggcaccgcc
aagcgcgtcgagatcaccaaggaaaacaccacgatcgtggatggcgccggcgctgccgaa
gacatccagggccgcgttgcccagatcaaggcgcagatcgaggaaaccacctcggactac
gacaaggaaaagctgcaggaacgcctggccaagctcgccggcggtgttgcggtgatcaag
gtcggcggcgccacggaagtggaagtcaaggagcgcaaggatcgcgtcgatgacgccctg
aacgctacccgcgctgccgtcgaagaaggcatcgttccgggcggcggcgtggctctgctg
cgcgcttcgtccaacctcaaggtcaagggtgccaacgctgatcaggacgccggcatcgcc
atcgtccgccgcgccctccaggaacccgtccgtcagatcgccagcaatgccggcgctgaa
ggttcggtcgtggttgccaagatcctcgagaacgcctcggtttcgttcggctacaacgcc
gcgaccgaccagtatggcgatctcgtccagctcggcgtcatcgacccggtcaaggtcgtg
cgcacggctctccaggacgcggcttcggtcgcttcgctcctgatcaccaccgaggcgctc
attgccgagctgcccaaggaagctgctccggccatgccgggcggcggtggcatgggcggc
atgggcggcatggacttctaa
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