Devosia sp. H5989: XM25_00975
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Entry
XM25_00975 CDS
T04003
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
deq
Devosia sp. H5989
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
deq03009
]
XM25_00975
Enzymes [BR:
deq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
XM25_00975
Ribosome biogenesis [BR:
deq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XM25_00975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKR54399
LinkDB
All DBs
Position
complement(187562..189193)
Genome browser
AA seq
543 aa
AA seq
DB search
MSESRSAPTTGDRLAKVMARSGLCSRRDAELWIAAGRVSVNGKVVKTPAFNVTERDKIAV
DGKPLAARQGTRVWLYHKPPGLVVTEKDPEGRPTIFEALNELGLPRVLTVGRLDINTEGL
LLLTNDGGLKRVLELPATGWLRRYRVRAHGSITQAALDKLEDGIEVDGVKYGPIEATLER
EQGHNVWLVLALREGKNREVKNVLGALGLEVNRLIRVSYGPFQLGDLAVGAVETVKDRVL
QDQLGERLASEANADFISELPEPRRAPDRPGRDFGKPARGGRAAPAGRPGRFRDEEGPTR
KIHFDDGRAPAEYKAKPQGRKKPEFRSEDDKPARSYGKREERPAREERDFDKKPRGKAAG
DKPFRSRGEKPLSDRPRRSHSDRPDAREAGEWTRKPRAPRSAAGFDDRSAAPKRSYASKP
HGAEGGKPRSRSADASPRPARRDGAGPARGPRPEGAGRPAGRGPRPEGGAPRSSTRSPRG
EGAPARGPRSDAPPRGKGGPRGARPEGAPKGRGGPRKDGGPSSGPRTPRPGGGAPRGPRK
PRG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagccgctccgcgcccaccacgggcgatcgtctggccaaagtgatggcccgt
tctggcctgtgttcacgtcgcgacgccgagctgtggatcgccgccgggcgcgtctcggtc
aatggcaaggtggtcaagaccccggccttcaacgtcaccgagcgcgacaagatcgcggtg
gacggcaagccgctggccgcccgccagggcacgcgcgtctggctctaccacaagcccccg
ggcctggtggtcaccgagaaggatccggaaggccgcccgacgatcttcgaggccctcaac
gaattgggcctgccgcgcgtcctcacggtcgggcgcctcgacatcaataccgaaggcctg
ctgctcctcaccaacgatggtggcctcaagcgcgtgctcgagctgcccgccaccggctgg
ctgcggcgctatcgcgtgcgcgcccacggctcgatcacccaggccgcgctcgacaagctc
gaggacggcatcgaggtcgacggggtcaagtacgggccgatcgaggccacgctcgagcgc
gagcagggccacaatgtctggctggtgctggcgctgcgcgagggcaagaaccgcgaagtc
aagaacgtgctcggcgcgctcgggctggaggtcaaccgcctcatccgcgtcagctatggc
ccgttccagctcggggacctcgccgtcggtgccgtcgagacggtcaaggatcgcgtgctc
caggatcagctcggcgagcggctggccagcgaggccaatgccgatttcatttccgaactg
cccgagccgcgccgcgcgcccgatcgccccggccgcgatttcggcaagcccgcgcgcggc
ggccgcgccgctcccgccggccgtcccggccggttccgggacgaggagggtccgacccgc
aagatccacttcgatgacggtcgcgcgccggccgagtacaaggccaagccgcagggccgc
aagaaacccgagttccgctccgaggacgacaagccggcgcgcagctacggcaagcgcgag
gaacgtccggcgcgcgaagagcgtgacttcgacaagaagccgcgcggcaaggccgccggc
gacaagcccttccgcagccgcggcgagaagccgctgagcgaccgcccgcgccgcagccat
tcggaccgtcccgacgcccgcgaggctggggaatggacgcgcaagccgcgcgccccgcgt
tccgccgccggtttcgatgaccgctcggcagcgccgaagcgctcctatgccagcaagccg
cacggtgccgagggcggcaagccgcgttcgcgcagcgccgatgcttcgccccgcccggct
cgccgcgatggcgcgggccccgcgcgcggtcctcgtccggagggtgcgggtcgtcctgcg
ggtcgtggtccgcgtcccgaaggcggagctccccgttcctccacgcgctctccgcgcggc
gaaggcgctccggcacgcggtccgcgcagcgatgcgccgccgcgtggcaagggtggcccg
cgcggtgcgcgtcccgaaggcgcgcccaagggccgtggcggcccgcgcaaggatggtggt
ccttcttcgggtccgcggacgccccgccccggcggcggcgcgccacgcggcccgcgcaag
ccgcgcgggtaa
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