Devosia sp. H5989: XM25_03250
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Entry
XM25_03250 CDS
T04003
Name
(GenBank) Ribulose bisphosphate carboxylase small chain
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
deq
Devosia sp. H5989
Pathway
deq00630
Glyoxylate and dicarboxylate metabolism
deq00710
Carbon fixation in photosynthetic organisms
deq01100
Metabolic pathways
deq01110
Biosynthesis of secondary metabolites
deq01120
Microbial metabolism in diverse environments
deq01200
Carbon metabolism
Module
deq_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XM25_03250
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
XM25_03250
Enzymes [BR:
deq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
XM25_03250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
CBM_11
P3A
Motif
Other DBs
NCBI-ProteinID:
AKR54832
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All DBs
Position
657850..658269
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AA seq
139 aa
AA seq
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MRVTQGTFSFLPDFNDDQIRTQVQYCIDNGWAVNIEFTDDPHPRNTYWEMWGLPMFDVAD
AAAIMLELESCRKVHDGKYIRLSAFDASHGWESIRISFIVNRPKEEPGFHLERDNGPGRQ
QHYHLRSYATDKPSGERYL
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttacccaaggcacgttctctttcctgcccgacttcaacgacgaccagattcgc
acgcaggtccaatactgcatcgacaacggctgggccgtgaacatcgagttcaccgacgat
ccgcacccccgcaatacttactgggaaatgtggggcctgccgatgttcgacgtcgccgac
gccgcggccatcatgctcgagctcgagtcctgccgtaaggtccacgacggtaagtacatc
cgcctctcggccttcgacgcttcgcacggctgggagtcgatccgcatctccttcatcgtc
aatcgcccgaaggaagagcccggcttccacctcgaacgcgacaacggccccggccgccag
cagcactaccacctgcgcagctacgccaccgacaagccgtccggcgaacgctacctctga
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