Devosia sp. H5989: XM25_17290
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Entry
XM25_17290 CDS
T04003
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
deq
Devosia sp. H5989
Pathway
deq00020
Citrate cycle (TCA cycle)
deq00785
Lipoic acid metabolism
deq01100
Metabolic pathways
deq01110
Biosynthesis of secondary metabolites
deq01120
Microbial metabolism in diverse environments
deq01200
Carbon metabolism
deq01210
2-Oxocarboxylic acid metabolism
Module
deq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
deq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XM25_17290 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XM25_17290 (sucA)
Enzymes [BR:
deq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
XM25_17290 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AKR57504
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All DBs
Position
complement(3525273..3528284)
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AA seq
1003 aa
AA seq
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MTRQEKNEAFLLTSFLYGGNADYIEELYARFKTDPSSVDPTWASYFGKLGDDAAQVSRNA
EGPSWARTDWPQAPNGELVAALDGNWGISPSQIAMKTAKAVTAKAESAGAPVPTPAQVMQ
ATRDSIHAIMMIRAYRMRGHLQADLDPLKLKAPEPAPELDPATYGFQPSDYDRKIFIDNY
LGLEFATVPEMLAILQRTYCSTVGVEFMHISDPEAKQWIQERIEGPDKEITFTPEGKKAI
LNKLIEAEGFEKFLDVKYTGTKRFGLDGSESLIPALEQIIKRGGALGVKDIVLGMAHRGR
LNVLTQVMQKPHRALFHEFKGGAFYPDDVEGSGDVKYHLGASSDREFDHNKVHLSLTANP
SHLEIVDPVVLGKARAKQDLHNSPDGKLLSYDQTRVIDRSMVLPLLLHGDAAFAGQGVVA
ECLGLSGLKGHRTGGSIHFVINNQIGFTTSPIYSRSSPYPTDVAKMIEAPVFHVNGDDPE
AVVYVAKIAIEYRQRFGRPVVIDMFCYRRFGHNEGDEPSFTQPLMYSRIRSHKTTLEIYS
EKLVAEGLVSAEDIENLKAGWRAHLEGEFEAGQNYRPNKADWLDGQWKNFKTAEVDGPRR
GDSGVEIARLTEIGTKLAKVPEGFNVHRTIKRFMDNRLQAIESGQGLDWATAEALAFGTL
VTEGHPVRLSGQDVERGTFTQRHSVLYDQETDASYTPLNALDPNQSRYEVINSMLSEEAV
LGFEYGYSLAEPKALTLWEAQFGDFANGAQVVVDQFISSGERKWFRMSGLVMLLPHGYEG
QGPEHSSARLERYLQLCAEDNMQVANCTTPANYFHILRRQITRDFRKPLILMTPKSLLRH
KRAVSGLAELGPDSCFHRLLWDDAEAPGVPKTTIKLAADDKIRRVVLCSGKVYYDLLEDR
EKRGIDDVYLLRLEQLYPFPAKALLDELSRFQNAEIVWCQEEPRNMGAWAFVQPYIDWVM
EQMGRAGQRPRYVGRPASASTATGLMRLHLEQLHSFLEEAFAK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgacacgacaggaaaagaacgaagcgttcttgttgacctccttcctctatggcggcaat
gccgactatatcgaggagctgtacgcgaggttcaaaaccgatccctcaagtgtcgatccc
acctgggcaagctacttcggtaagctcggcgacgatgccgcccaggtctccaggaatgcg
gagggcccgagctgggcccggaccgactggccgcaggcgcccaatggcgagctggtggcc
gcgctcgacggcaattggggcataagcccttcccagatcgccatgaagacagccaaggcg
gtgaccgcgaaggccgaatcggccggcgcgccggtgcccacgcctgcccaggtcatgcag
gccacgcgcgattccatccacgccatcatgatgatccgcgcctaccggatgcgcggtcac
ctgcaggcggacctggatccccttaaactcaaggcgcccgagccggcgccggagctcgat
ccggccacctacggcttccagccgtccgattacgaccgcaagatcttcatcgacaactac
ctgggcctcgagttcgcgacggtcccggaaatgctggcgatcctgcagcgcacctattgc
tccacggtcggcgtggagttcatgcacatctccgatcccgaggccaagcagtggatccag
gagcgcatcgaggggccggacaaggagatcaccttcacgcccgagggcaagaaggccatt
ctcaacaagctcatcgaggcggaaggcttcgagaagttcctcgacgtcaagtataccggc
accaagcgctttggcctggacggctcggaatcgctgattcccgccctcgagcagatcatc
aagcgcggcggggcgctgggcgttaaggacatcgtgctgggcatggcccatcgcgggcgc
cttaacgttctcacccaggtcatgcagaagccgcaccgcgcgcttttccatgagttcaag
ggcggcgccttctatcccgacgacgtcgagggttcgggcgacgtcaagtatcacctgggc
gcctcctcggaccgcgagttcgatcacaacaaggtgcacctgtcgctgacggccaacccg
tcgcacctggaaatcgtcgatccggtggttctgggcaaggcccgcgccaagcaggacctg
cacaattcgccggacggcaagctgctctcgtacgaccagacccgcgtcatcgaccggtcg
atggtcctgccgctgctgctgcacggggatgcggcctttgccggccagggcgttgtcgcc
gagtgcctggggctttcgggcctcaagggtcaccgcacgggcggctcgatccatttcgtc
atcaacaaccagatcggctttaccacctccccgatctattcgcgttcctcgccctatccg
accgacgtcgccaagatgatcgaggccccggtgttccacgtgaacggggacgatccggag
gcggtggtctatgtggccaagatcgccatcgaataccgccagcgcttcgggcgcccggtg
gtcatcgacatgttctgctatcgccgcttcggccataacgaaggcgacgagcccagcttc
acccagccgctgatgtattcgcgcatccgcagccacaagaccacgctcgagatctactcg
gaaaagctggtggccgaagggctggtgagtgccgaggacatcgagaacctcaaggccggc
tggcgcgcacacctggaaggcgagttcgaggcggggcagaactaccgccccaacaaggcc
gactggctcgacgggcagtggaagaacttcaagaccgccgaggtcgacgggccgcgtcgc
ggggattcgggcgtcgagatcgcccgtctgaccgagatcggcaccaagctggccaaggtt
ccggagggctttaacgtccaccgcaccatcaagcggttcatggacaatcgcctgcaggcc
atcgagagcgggcagggcctggactgggccaccgccgaagccctggctttcggcacgctg
gtcaccgagggccacccggtgcgcctttcgggccaggacgtcgagcgcggcacgttcacc
cagcgtcactcggtgctctacgatcaggagaccgacgcttcctataccccgctcaacgcg
ctcgatcccaaccagtcgcgctacgaagtcatcaactcgatgctttccgaagaggcggtg
ctgggcttcgaatacggctactcgctggccgagcccaaggcgctgaccctgtgggaagcc
cagttcggcgatttcgccaacggcgcccaggtggtggtggaccagttcatctcctcgggc
gagcgcaagtggttccgcatgtcgggcctggtcatgctcctgccgcacggctatgagggc
cagggtccagagcactcctcggcgcgcctcgagcgctatctccagctctgcgccgaagac
aacatgcaggtcgccaactgcacgacgccggccaattacttccacatcctgcgccgccag
atcacccgcgacttccgcaagccgctgatcctgatgacgcccaagtcgctgctgcgccac
aagcgggccgtctcgggcctggccgaactgggtccggacagctgcttccatcgcctgctc
tgggacgatgccgaggcgccgggcgtgcccaagaccaccatcaagctggcggccgacgac
aagatccgccgcgtggtgctgtgctcgggcaaggtctattacgacctgctcgaggaccgc
gagaagcgcggcatcgacgatgtctacctgctgcgcctcgagcagctctatccgttcccg
gccaaggccctgctcgacgaactctcgcgcttccagaacgcggagatcgtctggtgccag
gaagagccgcgcaacatgggcgcctgggcgttcgtgcagccctatatcgactgggtcatg
gaacagatgggccgcgccggccagcgtccgcgctatgtcgggcgcccggcttccgcgtcc
acggcaacgggcctcatgcgcctgcatctggaacaattgcacagcttcctcgaagaagct
ttcgccaagtaa
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