Desulfomicrobium sp. ZS1: NLA06_16410
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Entry
NLA06_16410 CDS
T08898
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
desu
Desulfomicrobium sp. ZS1
Pathway
desu02024
Quorum sensing
desu03060
Protein export
desu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
desu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NLA06_16410 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NLA06_16410 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NLA06_16410 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
desu02044
]
NLA06_16410 (ffh)
Enzymes [BR:
desu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NLA06_16410 (ffh)
Secretion system [BR:
desu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NLA06_16410 (ffh)
Eukaryotic Sec-SRP protein
NLA06_16410 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
APS_kinase
AAA_33
ParA
nSTAND3
AAA_24
Zeta_toxin
NACHT
Motif
Other DBs
NCBI-ProteinID:
UTF50118
LinkDB
All DBs
Position
3665137..3666615
Genome browser
AA seq
492 aa
AA seq
DB search
MFDSLSDRLESVFKKLRGHGRLDESNIQDGLREVRLALLEADVNFKVVKDFVEKVKARAL
GQDVLGSLTPGQQVIKIVHEELIELLGGENCALNLSGKPPYVIMMSGLQGSGKTTSAAKL
ALFLRRQKYAPYLVPADVYRPAAIDQLTKLGAELGVPVYPSTVDMNPVDICVDAMRDAEL
KGCSVILIDTAGRLHIDELLMQELVGIKEKCRPQEILFVADAMTGQDAVTVAEKFNEVLD
ITGVVLTKMDGDARGGAALSIKSITGKPLKFVGMGERLSELEVFHPDRIASRILGMGDVL
TLIEKAQSTIDSKEAEALEKKFRKAEFDLEDFRTQMRRIKKLGSLEGIMKLIPGMGQIRK
QLQDVQMPEKELGKVEAMISSMTMAERHEPKIINPSRKQRIAKGSGVTVTEVNQLLKNFE
QMQKMMKKMAGGKMPSMPQGGRMPGMPGMGAMPGGMPGMPGALPSGGGGRTAAEAAKLKE
KRKKAKKQRRKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagcctgtccgaccgacttgaatcggtctttaaaaaactgcgcggccacggc
cgactcgatgaaagcaacatccaggatggcttgcgcgaagtacgtctcgccctcctggaa
gccgacgtcaatttcaaggtcgtcaaggacttcgtcgaaaaggtcaaggcgcgcgccctg
ggacaggatgtcctcggcagcctgacgcccggccagcaggtcatcaagatcgtccacgaa
gagctgatcgagcttctgggcggcgagaactgcgccctgaacctgtcgggcaagccgccc
tacgtgatcatgatgtccggcctgcagggttcgggcaaaaccacgtcggcggccaaactg
gctctgttcctgcgccgtcagaagtacgctccgtacctggtccccgccgacgtctatcgt
ccggcggctatcgaccagctgacgaaactcggcgcggagctgggcgttccggtctatcct
tccaccgtggacatgaatccggtggatatctgcgtcgacgccatgcgtgacgccgagctc
aagggctgctccgtgatcctcatcgacacggcgggccgcctgcacatagatgaattgctc
atgcaggagctggtcggcatcaaggaaaagtgccgtccgcaggaaattttgttcgtggcc
gatgccatgaccggccaggacgcggtgaccgtggccgagaagttcaacgaagtgctggac
atcaccggcgtggtcctgaccaagatggacggcgatgcccgcggcggcgcggccctgtcc
atcaagtccatcaccggcaagccgctcaagttcgtcggcatgggcgagcgcctgagcgag
ctggaagtatttcatccggaccgcatcgcgtcccggattcttggcatgggcgatgtcttg
acgctgatcgagaaggcgcagtcgaccattgattccaaggaagccgaggccctggaaaag
aaattcaggaaggccgaatttgatcttgaagatttccgtacgcagatgcgccgcatcaag
aagcttggctcccttgaaggcatcatgaagctcatcccgggcatggggcagatccgcaag
caattgcaggacgtgcagatgcccgaaaaggagctcggcaaggtcgaggccatgatcagt
tccatgaccatggccgagcgccatgaaccgaagatcatcaaccccagccgcaagcagcgt
attgccaagggcagcggggtcacggtgaccgaggtcaaccagcttctcaagaattttgag
cagatgcagaagatgatgaagaagatggcgggcggcaagatgccgtccatgccgcagggt
ggccgcatgcccggaatgccgggaatgggcgcgatgccgggcggcatgcccggaatgccc
ggcgcgcttccttccggaggcggcgggcgaaccgccgcggaagctgccaagctcaaggaa
aagcgcaagaaggctaaaaagcagcgcagaaaaaaatag
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