Dehalogenimonas etheniformans: HX448_04970
Help
Entry
HX448_04970 CDS
T08265
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
deth
Dehalogenimonas etheniformans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
DNA_ligase_OB_2
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QNT76087
LinkDB
All DBs
Position
complement(656376..657392)
Genome browser
AA seq
338 aa
AA seq
DB search
MASKTSGIDLRAITGARRAQMPARLAPMLATLIDKPFTDPGWYFEPKLDGYRIVAFVSGG
ESRLQSRHFQDYTDRFPIIANELSEQAVDDAIFDGELISLDEKGKPCFQCLQQHLQRSAS
QKTVYTLVYYVFDLVHLNGYDLMAVSQSERVSLLQKVFNTGKSVKAISRLEGNGVDIFKA
AIDAGFEGIIAKRRDARYQEGKRSTDWLKIKGTLADEFVIAGYTAGQGARSGVFGSLVLG
QYDSTNRLIYAGNVGTGFDERLLDDLKSKMKKLVTDKSPFLSEIPFEAKTTWLKPELVAE
IKYAERTRDGILRQPVFLRLRTDKPAGEVRPQTILSKE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttggcttcaaaaacgtccgggattgatctgcgcgccattacgggagcccggcgtgcacaa
atgccagctcgccttgcgccgatgcttgcgaccctgatagacaaaccgtttacggacccg
ggctggtatttcgaacccaaactcgatggttacaggatagttgcctttgtcagtggaggc
gagtccagactacagtcccgccattttcaagattacaccgaccgttttcccatcatagct
aacgaattgtccgaacaggcagtagacgacgcaatattcgatggcgagcttatttcattg
gatgaaaaaggtaagccgtgttttcagtgtttgcagcagcaccttcaacggagtgccagt
cagaaaaccgtatacaccctcgtttactatgttttcgatcttgtccacctcaacgggtat
gatctgatggctgtctctcaatctgaacgcgtcagcctgctccaaaaggtgttcaatacc
ggcaaatcggttaaagcaatttcacgcctggaagggaacggtgttgacatcttcaaagca
gccatcgatgccgggttcgagggaattatcgccaagagacgcgatgcccgctatcaggaa
ggcaaaagatcgaccgactggctgaaaatcaaaggaacgcttgccgatgagttcgttatc
gcaggttataccgccggccagggggcacgatcgggcgtcttcggttcgttagtcctgggt
caatatgatagtaccaatcgcctgatctacgccggaaacgtcggaaccgggttcgacgaa
cgcctgctcgatgatttgaagtcgaagatgaaaaaactggttacagataaatcaccattc
ctttccgaaatccctttcgaggcaaaaactacctggctcaaacctgaacttgtggccgag
atcaaatacgcggagcgcaccagggatggcattttgcggcagcctgtctttttgagattg
agaaccgataaaccggccggagaggttaggccgcagacgatcttgagtaaagaataa
DBGET
integrated database retrieval system
