Cavenderia fasciculata (cellular slime mold): DFA_01077
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Entry
DFA_01077 CDS
T02668
Name
(RefSeq) SNF2-related domain-containing protein
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_01077
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_01077
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
DFA_01077
RSC complex
DFA_01077
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
DFA_01077
SWI/SNF complex
DFA_01077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
ResIII
RPN5_C
Motif
Other DBs
NCBI-GeneID:
14874094
NCBI-ProteinID:
XP_004359052
UniProt:
F4PQN5
LinkDB
All DBs
Position
Unknown
AA seq
1993 aa
AA seq
DB search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NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgatggggactccacctgttgactataatgcaatgcaacaacaacagtttatgaaccca
tatatgcaaccacaacaacagcagcagcaagttgcactccaacagcagcagcagcagcca
cagcaacatcccgagatgatgcaacagcagcaacagcagccgcagcagcagtatactgga
atggcaattgataataataataataataatactagtggagcaggagtagcaaacaacaat
cagtttatgaagcaaccatcagtagtgggtgttcaacaacaatcctctacacagcagcaa
tcatcctctcctcctatatcatcgccaatcatgtacgtttctacacctacacaacagcaa
catacacctcaacaacaacaacaacatacacctcaacaacctcaaacccctcagcaacaa
caacaacaagttcaacaaatgatgaacaaacaaatcacaccaaataatacatattatact
caacaaggtcaacagcagcagcagcagcaaccaatgtatcaggcacaacaaatgtcttct
ccaccaatggtgccaactgtacagaatcaaccaccaccaatgctttcccctgctcaacaa
caatatcaataccaacaacaacaagctcaacaacaacaacaaatgctacaacaacatttg
caacaacaggctcaagctcaacaacaacaacaacaacaacaagctcaagctcaacagcag
gttcaacaacagcaggctcagcaacaacaagctcaagctcaacaacagggacagaacaat
caaatacaacaaggtcaacaacaagctcaagctcaagctcaacagcaacaacaaccacag
ggacaggttccacaacaacaacaacaacagacacagagtcaacctcaacaagcaccactt
ttaagtttctcaaaagaagctatccttgaaatatatacagcaaccgagaatttacaaaag
gcactgtcagatgtgatggatccacaatatcaacaatatgtacaaagcttgagaagtatt
agtatgagtgggttgtcttggaatgcttcagagaccaacctttttaaacgagttattgct
aaccatcgagtactagcagatgcacaaaagacgaaacaagccaaatctgaacatcaacag
cttgtacaacagcttgcacaacaacaacaacaacaacaatccaatccaatttatggtggt
ggcactataacaacaccaccaattcaatcacctatgatgatttctcaaacaacaaatata
gctactacaccgactacaacaacaactacaataacaacaccaacaccaacggcagcagca
gcggtttttcaacaacaacaacagattatccaaggaatgccaattggtaaaccattgatg
actccagagcaaatcaattttgtaaaactacaagtccgcgcgaatcaatatattgttaaa
tggctacaaactggagagccattgccagcaggatttttccaacaattggttgcctataaa
aatggggcaatgccacctatcattgcaactcaaactccacctcaacaacaaccattatct
attcaacaacaacaacagcaacagcaacagcaacaacaacaacaacaacaacaacttgtt
aaacaaccatcaattgttagtccacctattcaactccctcaatctctaccacaacaacca
gttttggagaatacaacaactacagcagccattgtacagcaaccgattgcagtggtggct
gctgccgccacacctgttgtagttgcacctccacctccaccagttgtagttgcaccaccc
ccaccaccacctccaatgcaatgtcctgcacaatatattataccacctgttacagacagt
attaaaactgttccattggatcaccaattcctcagagaggcaagagagattagcataaaa
gaggcaatgaatcagagaacaacgtatttgaaaaagagtctaaaagagtttgatgatcaa
gaggcttcagctgctgtaactgcagctgccagtagtccaaacgccgaacaaaaagatgga
tcatcatcgagcagtgttggagcagttgccaatggagttggtcatacccaagtcgaaaag
atttgtgccagtcaaaatgcacaaagaattcgtatggccatagagtacaaacaactcagt
ctctttgaggttcagaaaaagttgagagccgaattactcgactcggtcgacagtagtatg
tttgtcaacaacactactgctttgctgggcagcaagcatagttcatcgtcgtcgtcatcg
tcgtcgtcacaaagtggttcagcttctaaaaagaaaacaaagttggatggtattctaagc
tcacaacgtatcatgccatacaatgaaaccaaccaaaatacaccagaggcaaagacacga
atgtcgagcttcctcaaacagattttggatcatggacgcgagtttaaagagtttcacagc
aaccagatgcaatcgaccaaaaaggtagccaagcgtgtaaccagctactttgccatgcaa
gagaaaaaggagcagcagcagcgtgaaaaggaggagcgtgacagacttcgtgcactcaag
agcaacgatgaaggcaagtacctcaagttgctcgaacagaccaagaacaagcgtctacgt
gagttgtttgaccagaccaacgagtttctcgacaagatctcgcatctcattcaaaaggaa
aagatgcaagacgaggaggaactggccttgcaacaagcagaggcagccgatgcagccagc
aacgccaccaccatcactgacgagatatcgaccaacaatagcagcacgagcagcactgca
cccgttagcaagccagccgacgcctctgccaagcgtccggctaccgcaccagctcccgct
cagacgacactagtcagcaaggcacattcatactatagcaaggcccattccatcacggaa
gagattccagagcaaccacagcttttggagggcggtcagttgaaaccctaccagatgcaa
ggtctgcaatggatggtgtcactgtacaacaacaagctcaatggtatcttggccgacgag
atgggtctcggaaagactatccagaccatcgctctcatcacctatctcatggaaaagaag
caaaacaagggtccctacttggtggtcgtccctctctctacactagccaattggggtcaa
gagttttcaaagtgggcaccaaaggtactcaaagtactctattatggtaaaaaagaggtg
agaaaatcactctacgatacccatattgccccaacaaagtttaatgtactcgtcaccacc
tatgaatacattatcaaggataaaaatatgctctccaagatcaagtggaactatctcatc
attgatgaaggtcatcgtatgaaaaactatagttccaagctctctattatccttggtaat
gcctatcactcgagataccgtattctcctaactggtactcctctacaaaacagtttacca
gaactttgggcactcctcaatttcctgttgcccaacattttcgattcggtcgatgatttt
gaacaatggttcaatgctccatttgcaggtgaaaagttggaaatgaatgaagaagaacaa
ctactcatcattcaacgtcttcacaaggttcttcgtcctttccttttacgtagactcaaa
actgaagtcgaaactcaactacctgataaagttgaaaaggttcttaaatgtgaaatgtct
gctttccaagctaaaatgtatcaattaattagatctaaaagtgttaacaaattgaatcaa
gaagaaggagcaccaagacttgcaagaggattaaagaatacattggtacaattaagaaaa
gtttgtaatcatccttatctattttatgatgaagaatatgcaatcgatgagtatatgatt
agatcggcaggtaaatttgatcttttggacaagattcttccaaagttaaaggcatctggt
catcgtgtactcatattcagccaaatgacgcatttgattgatattctcgaacattatttc
acctacaaaggttacaagtaccttcgtttggatggttcaaccaaatcggaagagcgtggt
cccatgttgaatcttttcaacgcaccaggcagcgaccttttcatttttgtactaagtact
cgtgctggtggtttgggtttgaatctccaaaccgccgatactgtcatcatctttgactct
gattggaatcctcagatggatctccaagctcaagatcgtgcgcatagaattggccagaag
caaacggtaaaagtattacgtttggtcacagtcaacagcgtggaagaaaagattttggca
agagccatctttaaaaaggagttggacaagaagattatccaggctggtcagtttaacaac
aagagcaagtcgtcagacagaatgaaaatgctcgagtatttgatggcacaggatgagact
gcagagatggagcgacagggtattccaaacgaccaacaaatcaacgaaatgattgcgcgt
acacctgaagaggtcgagctctttgaacgcatggacaaggagcgttcagagatggaaaac
aaacgttggaagctagaaggaaagaagggcgagtacaagcgtctctgccaagaggacgag
cttcccgcttggatctccaaggaggttgaggtcaccgaagacatgagctttgtgtttggt
ccaggtcagcgaccacgctcatccaacgccaaagacgtggacgaccaggaactcttgcgt
ctgctcaacaatggagagagacgtcgtcgtaccgcctccaacgcagccgtctacatcaac
gaatacattgacgacgagagcgacgattccagctcatcgtcgagtgaagaggagcaggag
gagtaccgtcaaaaaccaactccaaagaaccacaagagaaaggagcttgatgacgaagac
tatgaagacagctacagtggcagccaagtcagcacgcctaccagtaacagcaaatacccc
acccccaagaaacgtgccaaaactgctgccaaggaacgcaaggcacctgccaagaaaaga
gggtctactgctgctccaccccaacagccgtccactccatccactccatctgacaataga
gaactcctcactccaccacccaccccaaccacgtcgtcatcgggagctacgccctcacaa
cccgccccagcacccagaaagtacagcggacgtggtagaccagccggcaccatcaaaaag
cgaccaaccaccgagaatgagatcaagtatcttgacatttatgatgcgttccgattggac
acggacgaagagggaagaaagcgttgcgatgtctttttgcgtctgccaagcaagcgtgac
tacccagactactacaacatcaccaaggagccaatcgacatgaagatcatcaaggaccgt
atcattggcaagaaatatcatacacctgcacagtttgctgctcatgtaaatactatgttt
tacaatgcccaagtatataaccaatcgggttcagagatctttgaagatgccgttcacctt
caaaaattctttaccaaacttttcaatgaagcttttccaaacaaccaacttcccactcca
aaaccacccctatcaccaactcaacctattcatttgtcagctgacagcgtcaaaagagag
ccaatcccaatggcaagtctccaagctgcctctaccaccacttccacctcttccaccagc
agtacaagtactacctccaccaccgacaatagtttactcgatgtcgatgaagatcaagta
tcaaagaaacaaaaacttgcaaacaatcacagtaccccaagcaatggtaaaccttatgat
ccaatgtctctatcaagcatgatttgcgacgccaacaattccccaatgtcatctcctcca
actaccttttccaaaacaaacaattcgagagcaaagtttagtaaattctctgatgatgac
aacgatggtatgatggatgacgatgacgaagatgacctataa
DBGET
integrated database retrieval system
