Cavenderia fasciculata (cellular slime mold): DFA_02005
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Entry
DFA_02005 CDS
T02668
Symbol
utp13
Name
(RefSeq) WD40 repeat-containing protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DFA_02005 (utp13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_02005 (utp13)
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DFA_02005 (utp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Utp13
ANAPC4_WD40
NBCH_WD40
BUD22
Motif
Other DBs
NCBI-GeneID:
14873704
NCBI-ProteinID:
XP_004359966
UniProt:
F4PRC1
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MTSISNKIVKRNINTDESTTTTTTTTTEKTTVTLDNNEIIRQRREMIESKKRKKTIIYYT
VIILFIVIFFLGTEVKMVESTTAMNRVIELNYTQIELVIKKSPPLPPPLAQINSSLLQHN
DSNIQATTPFLLLLYRDECSFSKQMIPIFDELSNIFPQIPHYRYNNKIPSSIGYSRLTPT
IVLVHKNHSSSLTTKTNIDNNNSGIDNQNNNNNNNNNNNNNNNNNNNNNNNNNNNNNISD
TKNMGIKYFRYTGIKSFGNLKQWIIESTKLNPINDDTQQQQQTNPTIEKEEEEEMSIDLS
KVKFVQVVDDEDLSDYEEEQEEEEEEEEETKVAKVDAETEEEKKMSQKRKLKSLFKPDYS
ISSLYTGGFITVSHDSKFIISTNGYTLCFTESDSGIEYCQPLKLDAKVSSFAINSKSNLL
VVALNNNIVQLYKLIYNDIDTTTTTTTTTTTTTTTTTTTTTTTTTTASTTSDDKEQQQQR
IEFKLEKQFKCGESPINSIDFHSSSVLVAIGSSDGIVQVWDVEKGYCTHQFKENYGVVSI
VKFHPKQLFIVAVSDDSKIRLWDLFGKNHFVLDNHLSVVSSLTFTNDSKLLVSAGRDKVI
NVWNIEKSIAAAASGNNAPNATTTIVTPQKTIPIFQELGGMIALPNRYYQNVESCQLPQE
FIEKINKTIIKLNGINQQTNTVNNLNIVVGGEDVLRAWCIETGECLWNDQGIEFKKKTQK
EMEKASEFLNNPNIITSVLCRGDLLLSITSEHNIMKFNTNTMERNGEIIGYNDEIVDIKY
IDQDNIAVATNSNEIRCYNLKTKQPKLLRGHENLVMSLDVSADGKTIVSASKDHTIRLWD
ANQHKCIAIGKGHTSEVTSVAISKKAGSNRFAISGSGDKTIKLWKLPNTDAKTTTTSQPL
LQVSKTVVAHEKDINCIAIAPNDKICASASQDGYVKIWNISDLSLVQSFKAHKRGIWYTE
FSPVDQCLLTCSADGTIKLWSLVDYTCLKTLEGHQTSVLRASFVTYGMQVISSSSDGLLK
LWTIKTSECVATFDEENAHQNSKVWSLAVNHNSKDKEHPQFITGGSDSKIIVWSDHTVTE
QEKHHRKQEEQILNQQMLDTSLLKKDYSRSLKLALILNQPHQSLRIFQTIVMEQDKQIEE
NNQDNNSLMKSVLSKLSTNDLLKCLKYIRDWNTNSRFVHVSQIVLYSILTLLKAEQLLSF
EKELATLLESMIPYNEKHFNRVDRIIQKTYLLDYTIASINPTLTSNNIFNKN
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacttctataagcaataaaatagtcaaaagaaatataaatacagatgaaagtacaaca
acaacaacaacaacaacaacagaaaaaacaacggttactctagataacaacgagatcata
agacaaagaagagaaatgatagaatcaaaaaagagaaaaaagactataatctactacaca
gttattatattgtttatagtcatattctttttggggactgaagttaaaatggtagaatct
accactgctatgaatagagtaatcgaactaaactatactcaaattgaacttgttataaaa
aaatctcctcctcttcctcctcctcttgctcaaatcaattcttctctactacaacacaat
gattcaaatattcaagcaacaactccatttctcttattgttgtatagagatgaatgtagt
ttctcaaagcaaatgataccaatatttgatgaattatcaaatatctttcctcaaatacca
cattatagatacaataataagattccctcatcgattggatattccagattaacaccgacc
attgttttggtacataaaaatcattcctcctctctaacaacaaaaaccaacattgacaat
aataatagtggtatcgataatcaaaataataataataataataataataataataataat
aataataataataataataataataataataataataataataataataatatttcagac
accaaaaatatgggtataaagtactttagatatactggtataaagtcatttggaaatctc
aaacaatggatcattgaatcaaccaaattgaatccaatcaatgatgacacccaacaacaa
caacagacaaaccctacgattgaaaaagaagaagaagaagagatgagcattgacctttca
aaagttaaatttgttcaagtagtagatgatgaagatttaagtgattatgaagaagaacaa
gaggaggaggaggaggaggaagaagagacaaaggtcgcaaaagttgatgcggaaacagaa
gaagagaaaaaaatgtcacaaaagagaaaattaaagtcattgtttaaaccagattactct
atatcatcattgtatactggtggttttattacagtatcacatgactctaaattcattata
tcaaccaatggatatactctatgttttacagagagtgacagtggtatcgaatattgtcaa
ccattaaaattggatgcaaaggtttcttcatttgcaatcaatagcaagtctaatctattg
gttgttgcattaaacaataatatagttcaattgtataaattgatttataatgatatcgat
actactactactactactactactactactactactactactactactactactactact
actactactactactactgcttctacaacctctgatgacaaagaacaacaacaacaaaga
atagaatttaaattggaaaagcaatttaaatgtggagagtcaccaatcaatagtatcgat
tttcattcatcaagtgtacttgtagctatcggttcttctgatggaatagttcaagtatgg
gatgtagaaaagggttattgtactcatcaatttaaagaaaattatggagttgtatctatt
gtgaaattccatccaaaacaattatttattgttgctgttagtgatgattccaaaattaga
ttgtgggatttatttggaaagaatcattttgtattggacaaccatctttcagttgtatca
tctttgacatttacaaatgatagtaaattattggtatctgcaggacgtgacaaggtaatt
aatgtttggaacattgaaaagagtattgctgctgccgccagcgggaataatgcaccaaac
gctacaaccaccatagtgacaccgcaaaagactataccaatattccaagaacttggagga
atgatcgctcttccaaatagatactatcaaaatgttgaatcatgtcaacttcctcaagag
tttattgaaaagataaacaaaacaattatcaaattaaatggaatcaatcaacaaacaaac
acagtaaacaatttgaatatagtagttggtggagaagatgttttaagagcatggtgtatc
gaaactggtgaatgcctttggaatgaccaaggtatcgaatttaaaaagaaaactcaaaag
gaaatggaaaaagcttctgaatttttaaataatccaaatattattacatctgttttatgt
cgtggtgatttattattatcaatcacatcagaacataatattatgaaatttaatacaaat
acaatggaaagaaatggtgaaattattggttacaatgatgaaattgttgatatcaaatat
attgatcaagataatattgctgttgcaacaaattcaaatgaaattagatgttataattta
aaaactaaacaaccaaaattacttagaggtcatgaaaatttagtaatgtcattggacgtt
tctgccgatggaaagacaatagtatcggcatcaaaagatcatactataagattgtgggat
gccaatcaacataaatgtattgcaattggaaagggacatacatccgaggttacaagtgtt
gccatctccaagaaagcaggatccaatcgatttgcaatctctggtagtggtgataaaaca
attaaattgtggaaactaccaaatacagatgccaagacaacaacaacatcacaaccacta
ttacaagttagtaaaacagttgttgcacacgaaaaggatatcaactgtattgcaattgca
ccaaatgataagatttgtgcatcggcatcacaagatggttatgttaaaatatggaatata
tcagacctttcattggtacaatcattcaaggctcataaaagaggtatttggtatacagaa
ttttcaccagtcgatcagtgtctcttgacctgttcggctgatggtaccataaagttgtgg
tcacttgttgattacacttgtctcaagacattagagggacatcaaacatcggttttgaga
gcatcttttgttacctatggtatgcaagtcatatctagtagtagcgatggtctcttgaaa
ttatggaccatcaagacgagcgaatgtgtagctacatttgacgaagagaatgctcaccaa
aacagcaaggtgtggtcattggcagtcaaccacaactccaaggacaaggaacatcctcaa
tttatcactggtggatccgattcaaagattattgtttggagcgatcatactgttacagaa
caggaaaaacatcaccgcaaacaagaagaacaaatcctcaaccaacaaatgttggatact
tcacttttaaaaaaagattattctcgatctttaaagttggctttgattttgaatcaacct
catcaatctttaagaatatttcaaacaattgtaatggaacaagacaaacaaatagaggaa
aataaccaagacaacaattctctaatgaaatcggttctttcaaaactttcaacaaatgat
ttgttaaagtgtctcaaatatattagagactggaatacaaattcaagatttgttcatgtc
tctcaaattgttttatattcaattttgactttattaaaagcagaacaattattatctttt
gaaaaagaattggctactcttttagagtcaatgattccatataatgaaaaacatttcaac
agagtagatcgtatcattcaaaaaacttatttattggattacaccatcgcatcaatcaac
ccaacacttaccagtaataatatctttaacaaaaattaa
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