Cavenderia fasciculata (cellular slime mold): DFA_05053
Help
Entry
DFA_05053 CDS
T02668
Symbol
lvsA
Name
(RefSeq) BEACH domain-containing protein
KO
K22262
WD repeat and FYVE domain-containing protein 3
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_05053 (lvsA)
Membrane trafficking [BR:
dfa04131
]
Autophagy
Aggrephagy
Scaffold proteins
DFA_05053 (lvsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beach
WD40
PH_BEACH
NBCH_WD40
DUF4800
Motif
Other DBs
NCBI-GeneID:
14875521
NCBI-ProteinID:
XP_004360774
UniProt:
F4PN70
LinkDB
All DBs
Position
Unknown
AA seq
2827 aa
AA seq
DB search
MKDLLKDLPNQLTGDSPPPPSIPQHPPNQQQQQSGSGSSSPSHTPSPPIRNYSGNELYNQ
QQQQQQQQHQQQQQQLLLQSLPPAPQVNAWQLFPGNEVTSLQPKPLQAARLKTFWAEFLS
SKSDKDKVARLNRLLPYFLGLHEERRIDVRNMTDVFGTNAKSFAFAVSRRLVKDLQELSK
TMTAQPRDAHARELYKYLATSGSNVCGFDLLYTLEILSEAAISCEAMSEASVPSTLARSL
QLLFLVPSNILDQTRGIVEDKIIRTLCHLARQRHAIEELQKSDTLSIIFSLMTAECPPTH
RLFRSKVISFGADLSDLLSPTITYLNSKKIIIHLIQDISNNFNNMGYSKEMIISIIQMIF
KILSESAKKSAILLEDFQRNDGYNFLLTALTNLEPSCKEKPHLFDQLLDSITSLVYVGYG
TITLPDSSPVPYQSSITQSLKEISSQNSIVKNESILTLFEQYFLNSKMEENRLKVLDKIL
SIYSSNPANFILLQHLKTLTNFIQSFEKLSYNLKYHVMKIVCFVVTVLNVVPFQELNTFS
LLVHENPSVNTLEMIYQLITTLVNFEFRYKHIFREAGLLDILIKVIGLLSTETIDRFKLL
QKQLGNKSPQQHQQLHEQHEQQDQDISTQTFPILLDSIYLLISEHPDNINIVRKYGFFDT
LLSIIPFSFVRLKSLRILQQLIKYDNDTTQREFDGLVKMLTSTSKEAFCVKTDIFNSIKK
LFTISKFSRDSFREHGGFVSIISVLIGMESSFKTWDQEKIQRKQIKQEENDEEENETNMI
QEEEKNDKQIIINGKEKIQDERLHLLEAICRTTTSALCGNQQNRASFEQQIGYSTFATGL
VMTGVLNTSKALRVVDFIFDMVTENLNGSDALSNRMIINNVEAFHVILDIIPHIDNQNDV
LDIVRRLNMMAEYGRYNQEALSKLAIPDWILTKFPTSLSNVDDPLQPHLLTLIQTVGANC
LSGSELRRFVRLLQPDHSPEVLLKILCSMAQSPAAPPYFEFNLSKIPYGYVHLPIGSTRN
WPPTNGYSMLFWLYIERGATGAQQIDLVNVYSDDRKSQLAIFIKGGRLTIHIYNNSKYVI
EYGAFAFEEGRWYHIGIVHARRLLSGTDFKIFIDGFLRYTAAKAQYPAQASTLTVDLGAS
NPSRFPADQIWRIGPFYLMEEALSSKHINTIYFLGPNYCSNFRGRFSPYQTYEIINNQNL
TAIRELDYGDQLGPLNLAKVSMQIDESRIIAGLCANNRREVRIKDRDHVSAGLPPHIDNI
IATSNANKDASASSSSYGNHSMGSGKDGEIRIEIVNQADPSGKTRGQLVASVEAFRRNKV
ADGIRKIGGMPIALLLLDKADEEEALFDAVGLLVGLIQNHPTNTHEMSIINGGFRLLEKI
LSSLCAYQEIYVTLFHLLLGSNPQALTAPACGPVDDQSQAQSQDKNAICTLEFHELLNIF
KTVERNVYCVEAAQLILSMVKKSYEENFQLLASYREQQQQQHAANADIVDNPESVSIFSP
VLVPGSALPHASPNSSSSASPSVANTSPLSISQTLNPPSKPNELNSSTGSAGSSASSSNP
STSSSAPNANPSSNQSTPTTATNNMLSRVGSFFSKVEEKTMELVELSSEGVQSGKKKRAS
ISTSPAHLASAFKQMSSASGTTPTSGGAVNSSTGGTNLTYTQSDHSNLSSSTASGVSTVS
SMMEPSQLTASSLLVSSNEVGLVAQLTPIQSPEGASNLQHTILNYFMYLFHENPQFQQEW
YATVKFTAMLVDRLHVDVFRPSLQRRVLLFLVKMLEKLEADRPGLKHVSPLYRQLNRVIL
LIVNNAHSEQQEFIYLVGHILNHQRIVFSENNSDTEFFASLCFPLFKLSVVQPHMESMNI
GQDVSDTAAKLFKLLMSTRIPSEAINPLLVYRPSGSTKTELADLRPGFELLARGSIQGDF
KPWIQENLLIVNMVFEEGPKRAHQTHLAAERKNAAETLQSIKLRRKDRIARNEKTERKTT
AHDEERVGHTTKKIQYFVRSEAERKKKIKSLEVDKQRFNAKQFEQIREQVTRERAVWGPA
APSTLDKWKLDSTEGPYRMRKKTEKNYDFYKNYPYVPPSFDELGGNNLLPLPSSGDSEAF
IKSLSENSDVANSLEPAYWKFTSTTDGSTIGGNYINEQQSNNNNNNSNNNNNNNNNNVNS
TTAVTGSTASSSTTGNRVRSSSMTVSTTTAKISTPVKAMDDNSSTGGSPSILNRSSSTDI
TPPASPLHSSAEDSMSVLQVHDQSMDQSMDQSMDQSMDQSDLNNNNNGNSNNSTSIFSLN
EEKESSSTGVSTPIMQGLKTSNEIDEDSPAVDENEERGEEENHAYTRLLDPYDQSYLREE
MRRNYRLTTVIYNCGSVDGMDKTEEKINTDWLTEGQVVQKKMVSHNCLKWGYEEVREVLK
RRYLLRPVAIELFSTDGRNTLITFKDETTRDEVYSKIITNVSNNSIGDISGISGGQTGVE
EEYGRDVGVKEKFTSMWRKSPLTLKWQQGQISNFQYLMHLNTLAGRSYNDLTQYPVFPWI
LKDFTSEELDLDDSTPSFTKYILWGLPDGSIRYHNGDKMKALEDHHDGPLTVLTSTDDGL
ICVSGGVDSMVCVFNLKRFSLTKRLCGHTGIVTALAASRPYSVIVSGSEDHTAIIWDLNR
MRYVRTLQGHDGAISCIAVHDTTGDIVTCSGTTINVYTINGEMLLTLKTSQIIYDQITTC
YWSKGAEWLGENVLITGHRDGKIKVWGLESRLLPSIDSEPLSTLVFKNVLILRSTFYNLQ
SHNTAITSIYLTNDQQKLYTGDIEGKICLWSDSDSSQIKQRGWTLNPTDLRTMLPTNVGT
GTKHGLF
NT seq
8484 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgttaaaggatctccctaatcaattgactggggattcacctccacctcca
tccattcctcagcaccctccaaaccaacaacagcaacagtcgggatcagggtcatcgtct
ccatcacatacaccctcaccacccatacgaaactactctggcaatgagctgtacaatcaa
caacaacaacaacaacaacaacaacaccaacaacaacaacaacaactattattacaatct
ttaccacctgcaccacaagtgaatgcatggcaactgtttccaggtaatgaagtgacatct
ctgcaacccaaaccactacaagcagcacgactcaagacattctgggcagagttcttatca
tccaaatccgacaaggataaagtcgcccgtttgaaccgtctcctcccctatttcctcggg
ttgcatgaggagcgacgtatcgatgtgcgtaacatgaccgatgtgtttggtaccaacgcc
aagtcatttgcatttgccgtgtcgagacgtctggtcaaagatttacaggagctgtccaag
acaatgaccgctcagccacgcgatgcgcatgcgcgtgaactctacaagtacctggcaacg
agtggcagcaatgtctgtgggtttgacctgctctacacactcgagatactctctgaagca
gctatcagctgcgaagccatgtctgaggcatctgtcccctcgacattggcacgttctcta
caactactcttcctcgtaccctccaatatcctcgaccaaacacgcggtattgtcgaagac
aagatcatccgtacactgtgtcacctcgcacgtcaacgacacgcaatcgaggaacttcaa
aagtccgacacactctccatcatcttttcgctaatgactgccgagtgtccacccactcac
cgtctcttccgttccaaagtaatctcctttggtgctgacctaagcgatctcttatcacca
acaatcacctatttaaattcaaaaaaaataataatacatttaattcaagatatatctaat
aattttaataatatggggtatagtaaagagatgattatatcaatcatccagatgattttc
aaaatattatcagagtctgcgaaaaagtctgcgattctattagaggatttccaacgaaac
gatggatacaacttcctcttgacggcactcacaaatctcgaaccttcttgtaaagagaaa
ccacatcttttcgaccaactgctcgacagtatcacttctcttgtttatgttggatatgga
actatcacccttccagatagttcaccagttccctatcaatcttcaattactcaaagttta
aaagaaatttcaagtcaaaattcaattgtaaagaatgaatcaatattaacattatttgaa
caatactttttaaattcaaaaatggaagagaatagattaaaagtattggataaaatccta
tcaatctattcttccaatcccgccaattttatattacttcaacatttaaaaactttaacc
aattttattcaatcttttgaaaaattaagttataatttaaagtatcatgtaatgaaaata
gtatgttttgtagttacagtattaaatgttgtaccattccaagaactgaatacatttagt
ttattggttcatgaaaatccatcagtcaatacattagagatgatctatcaattgataacg
acattggtcaactttgaattcagatacaaacatatatttagagaagctggactactcgat
atcttgatcaaagtaattggtctattgtcaaccgaaacaatcgatcgttttaaattatta
caaaaacaactaggaaacaagagtcctcaacaacatcaacaactacacgaacaacatgaa
caacaagaccaagatatttcaactcaaacattcccaattttattagattcaatttattta
ttgatttctgaacatccagataatattaatatagttagaaaatatggattttttgataca
ttattatcaataataccattttcatttgttagattaaaatcattaagaatattacaacaa
ttaattaaatatgacaatgatacaacgcaaagagaatttgatggattggttaaaatgttg
acatcgacatcaaaggaagcattttgtgtcaagactgatattttcaactcgatcaaaaaa
ctattcaccatttcaaaattctctcgtgattcattccgtgaacatggtggttttgtttca
atcatttcagtattgattggaatggaatctagttttaaaacttgggatcaagaaaaaata
caaagaaaacaaatcaaacaagaagaaaatgatgaagaggaaaatgaaacaaatatgatt
caggaagaagaaaagaatgataaacaaataattataaatggaaaagagaagattcaagat
gaaagattacatcttttagaggcgatttgtaggactacaacatcggcgttgtgtggcaac
caacaaaaccgagcatcgtttgaacaacagattggatactcgacatttgcaactggactt
gtcatgacgggtgtactcaacacgagcaaggcgttgcgtgtggttgattttatctttgac
atggtgaccgagaatttgaacggcagcgatgctctgtccaacaggatgatcattaataat
gtggaggcattccatgttatactcgatattatcccacatattgacaaccaaaatgacgtg
cttgacattgtacgtcgtctcaatatgatggcagagtacggacgttacaatcaagaggcg
ttgagcaagctggctattcccgactggattctaaccaagtttccaacgtcgttgtccaat
gtcgacgatccgctgcagccacatttgctgacgctgatccagacagtcggcgccaactgc
ttgtcgggtagtgagctgcgtcgctttgtgcgtctgctgcagcctgaccattcgccagag
gtgctcctcaagatcctgtgctcgatggcacagtcacctgccgcaccaccctattttgaa
tttaatttgtcaaagatcccatatgggtacgtgcatctgccgattggaagcacacgcaac
tggccgccaaccaacggctactcgatgttgttttggctgtacattgagcgtggtgcgacc
ggcgcgcagcagatcgacctcgtcaacgtctactcggacgaccgcaagtcgcagctggcc
atctttatcaagggcggtcgtctgaccatccacatttacaacaacagcaagtacgtgatc
gagtatggtgcatttgcatttgaagaggggagatggtaccatattggtatcgtgcacgca
cgtcgtctgctcagtggcacagactttaaaatctttatcgatgggttcctgcggtacacg
gctgccaaagcacagtaccccgcgcaagcgtcgactttgacggtcgacttgggcgccagc
aacccgtcgcggttcccagccgaccagatatggcgtatcggcccattctacctgatggag
gaagcactgagcagcaagcatatcaacacaatctactttttgggacccaactactgttcc
aacttccgcggtcggttctcgccctaccaaacgtacgagattatcaataaccagaatttg
acggctatccgcgagcttgactatggcgaccagctcggcccgctcaatcttgccaaggtg
tcgatgcagatagacgagtcgcgcattatcgccggtttgtgcgccaacaaccgtcgcgag
gtgcgtatcaaggaccgcgaccacgtcagcgccggcttgccaccccatattgacaacatc
attgccaccagcaacgccaacaaggatgcgtccgcatcgtcgtcctcgtacggcaaccat
tccatgggtagcggtaaagacggtgagatccgcattgaaattgtcaatcaagccgaccca
agtggtaaaacacgcggtcagctcgtcgccagcgtcgaagcattccgtcgcaacaaagta
gctgatggtatacgaaaaatcggtggtatgccaatcgccctgttactcttggacaaggcc
gatgaagaagaagcactgtttgacgcggttggactgctcgtcgggttgattcaaaatcat
ccaaccaacacacacgagatgagtatcattaatggtgggttccgtctacttgaaaagata
ctctcgtcgctatgtgcataccaagagatctacgtcacactgttccatctgcttctgggt
agcaatccccaagctctcactgcacccgcgtgcggaccagtcgacgaccaatcacaggca
cagtcacaggacaagaacgctatttgcacactcgagtttcacgaactactcaatatattc
aagacggttgagcgtaacgtatactgcgtcgaagcagcacagctcatcttgtcaatggtc
aagaaatcgtacgaggagaacttccagctgctagcatcgtaccgtgagcaacagcaacag
caacatgctgccaacgctgatattgtcgacaaccccgagtcagtgtcgatcttttcgcct
gtcctcgtgcctggctcagcgttacctcacgcatcgcccaactcgtcgtcgtcggcgtcg
cctagtgtcgccaacacgtccccactgtccatctcgcagactctcaacccaccctccaag
ccaaacgagctcaacagcagcacaggcagcgccggcagttccgccagcagcagcaacccg
tccacctcgtcgtcggcacccaatgccaacccatcctccaaccagtccacccctaccacg
gccaccaacaacatgctgagcagagtaggcagcttctttagcaaggtcgaggaaaagacc
atggaactagtcgagttgtcaagcgagggagtgcaatctggcaagaagaaacgtgcaagt
atctcaaccagtcccgcacacctagcatctgcattcaagcaaatgtcatcggcatctggt
acaactccaacctctggaggagcagtaaactctagcactggtggtacaaaccttacttat
actcagagtgatcattctaatttgtcatcatcaacagcttcaggagtatctactgtctcg
tcaatgatggagccgtctcaacttaccgcgtcatcgttattagtgtcatccaatgaagtg
ggattggttgctcaactcactcccattcagtcacctgaaggagcatcgaatctacaacac
actattctcaactactttatgtatttgttccatgagaacccacagttccaacaagagtgg
tatgcaactgtcaagtttactgccatgctagtggatcgtctacatgtagatgtgtttaga
ccatcgcttcagcgtcgtgtcctattgttcctcgtcaagatgcttgagaagctggaagca
gaccgtcccggactcaagcatgtatcgccactctaccgccagctgaaccgtgtcatttta
ctgattgtcaacaacgcccattccgagcaacaagagtttatctacctcgtcggacatata
ctcaatcatcaacgtatcgtcttttcagagaacaacagcgataccgagttctttgcatcg
ttgtgtttcccactgttcaagttgtcggtggtacaaccacatatggagtcgatgaatatt
ggccaagacgtgtctgacacggcagccaagttattcaagttgctcatgtctacacgtatc
ccaagcgaggcgatcaacccactactcgtgtaccgtccatccggcagtaccaagactgag
ctggccgacctccgtcccggctttgaactcttggcacgcggtagtatccaaggcgacttt
aaaccatggattcaagagaacttgcttatcgtcaacatggtgtttgaggaaggtcctaaa
cgtgcacatcagacacatttggcagccgagcgaaagaatgctgccgagacattacagtcg
atcaagttgcgtcgcaaggaccgtattgcacgcaatgaaaagaccgagcgcaagacaact
gcccacgacgaagagcgtgttggacacaccaccaaaaagatccaatactttgtgcgaagt
gaagcagagcgtaagaaaaagatcaagagtctcgaggttgacaagcagcgtttcaacgcc
aagcaatttgaacagattcgcgagcaagtcactagagaacgtgccgtgtggggtcccgcc
gccccatcaacactcgacaagtggaaactcgactcgaccgagggtccataccgtatgcgt
aaaaagactgaaaagaactatgacttttacaaaaactatccatacgtcccaccttcgttt
gacgagcttggtggcaacaatctgcttccactaccatccagcggtgacagtgaagcgttt
ataaagtcactctcggaaaacagtgatgttgccaatagtttggaacctgcatactggaaa
tttacaagtactaccgatggttcaactattggtggtaattatattaatgaacaacagtca
aataataataataataatagtaacaataataataataataataataataatgtaaactcg
acgactgcagtaactggatcaactgcatcttcatcaacgactgggaatagagttagatca
tcttcaatgacagttagtacaacaacagccaagatatctacacctgtcaaggcaatggac
gataatagtagtacgggtggcagtccatcgattttgaatcgatcttcatcgactgatatt
acaccacctgcatctcctttacattcgtctgccgaggattcaatgtcagtgttacaagta
catgaccaatcgatggatcagtcaatggatcaatcgatggatcaatcaatggatcaatca
gatttgaacaacaacaacaatggcaatagtaacaactcgacatcaatcttttcgttgaat
gaagaaaaagagtcatcgtcaactggtgtatcaacaccgattatgcaaggtttaaagaca
tcgaatgaaatcgatgaagattcacctgcagttgacgagaatgaagaacgtggcgaagaa
gagaatcatgcgtatacacgtctcctcgatccatacgaccagagctatctcagggaggaa
atgcgtcgcaactatcgtttgacaactgtcatttacaattgtggtagtgtcgatggtatg
gacaagaccgaagaaaagattaatactgactggttgacagaaggacaggttgtacaaaag
aagatggtctctcacaattgcctcaaatgggggtacgaagaagtacgtgaggttctcaaa
cgtcgttatctcttgcgtcccgttgccatcgagttgttctcgaccgatggtcgtaacaca
ctgatcacgttcaaggacgaaaccactcgtgacgaagtgtacagcaagatcatcaccaac
gtatccaacaactcgattggtgacatttcaggtatttcgggtggacagactggtgttgaa
gaagagtatggtcgcgacgtgggtgtcaaggaaaagttcacttccatgtggagaaaatca
ccgctcacactcaagtggcaacaaggacagatctccaacttccagtacttgatgcatctc
aacacattggccggacgttcatacaatgatttgacacaatacccagtgttcccatggatt
ctcaaggactttaccagcgaagagttggatttggacgactcgacaccgtcctttacaaaa
tacattttatggggtctgccagacggctccatccgttaccacaacggtgacaagatgaaa
gcactcgaagatcaccacgatggcccgctcactgtcctcacttcaaccgatgacggactg
atttgtgtcagtggtggtgtcgactcgatggtctgtgtatttaacttgaagcgattctca
cttaccaagcgtctctgtggccacacgggtatcgtcactgccttggctgcatcacgtccc
tactctgtgattgtgtcgggttcagaagaccacactgccatcatttgggatctcaaccgc
atgcgttatgtgcgtacacttcaaggacacgacggcgccatctcatgtattgccgtccac
gacaccactggtgacattgtcacttgttcgggcaccaccatcaatgtctacacgatcaat
ggtgaaatgctacttacactcaagacatcacaaatcatctatgaccaaatcaccacttgc
tattggtctaaaggtgccgaatggcttggcgagaatgtactcatcacaggtcatcgcgat
ggaaaaatcaaggtttggggtttggagagccgtctccttccctccatcgacagtgaacca
ctctcaactcttgtctttaaaaatgtattaatacttcgttcaactttttataatcttcaa
tctcataatactgcaatcacttcaatttatttaacaaatgaccaacaaaaattatataca
ggtgatattgaaggtaaaatttgtttatggtcagactctgattcatcacaaattaaacaa
cgtggttggactttaaatccgacagatttaagaacaatgttaccaacaaatgttggaaca
ggaactaaacatggattattctaa
DBGET
integrated database retrieval system
