Cavenderia fasciculata (cellular slime mold): DFA_06158
Help
Entry
DFA_06158 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfa03016
]
DFA_06158
Enzymes [BR:
dfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DFA_06158
Transfer RNA biogenesis [BR:
dfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DFA_06158
Prokaryotic type
DFA_06158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
CCDC28
DUF4858
Motif
Other DBs
NCBI-GeneID:
14876474
NCBI-ProteinID:
XP_004361871
UniProt:
F4PK96
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MSSLSRYKIVCEYIGQTYTGWQRLSISKTSTTTTTTTIDGSPVNDSTKKQEYKYKYNKYN
KYNKYRDEEELDDEKKVGPRENGRSIQYAIEHGLSHIMRQRIQIVGSSRTDSGVNSLCQV
AHCDLPNQRYDKKGTIEQEQLTPSIIKIALNQQLKRHNHDIRIVSVEKVDNEFHSRYNAT
SRTYLYKIMTGVRPTEVPLELKNKVWPIWETLDIDQMKETASFLQGLHDFDSLRSAKCQA
KSPIRSISHIKIIDLPLPDIWRYNNDDSTPPKIQYIGLEIKGRSFLHNQVRIMSSCLAEI
GRGHMTLDNLKEIMKGRDRTLAPATAPAYPLTLVKVSYGENIEIDDTQTIRLQQLLDERK
EFELNNNNINNNNNNNNNDQKDNKKSTTNSPGLIDRLLTLLKK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattatctcgatacaagatagtatgtgaatacattggacaaacatacacaggt
tggcaaagactatctatttcaaagacttctacaacaacaacaacaacaacaattgatggg
tcacctgtgaatgattcaacaaaaaaacaagaatataaatataaatacaacaaatacaac
aaatacaataaatatagagatgaagaggaactagatgatgaaaagaaagtaggaccaaga
gagaatggaagatcaatacaatatgcaattgaacatggattatcacatattatgcgacaa
agaatacaaattgtcgggtcgagtagaacagactcgggagtcaactcactctgtcaggtg
gcacattgcgatctacctaatcaacgatacgacaagaaaggaacgatcgaacaagaacaa
ctcacaccatccatcatcaagattgcattgaatcaacaactcaagagacacaatcacgac
attcgtattgtatcggtcgaaaaggtagacaatgagtttcactctcgttacaatgccacc
tctcgcacctacctctacaagatcatgacaggagtacgcccaacagaagtcccactcgag
ctcaagaacaaggtgtggcccatctgggagacactagatattgatcaaatgaaagagact
gcatcatttttacaaggtctacacgactttgatagtcttcgtagtgcaaagtgtcaagca
aagtcaccaatacgatccatatctcatattaaaataatagatctacctctacctgatatt
tggaggtataataatgatgattcgactccaccgaaaatacaatacattggattagaaatt
aaaggtagatcatttctacataatcaagttaggatcatgtcatcgtgtttggcagagatt
ggaaggggtcatatgacactcgacaatttaaaagagattatgaagggtagagatagaaca
cttgcaccagcaacggcgccagcctatcctctaacacttgtcaaagtatcatatggtgaa
aacattgaaattgatgatacccaaactatcagattacaacaattacttgatgaaagaaag
gaatttgaattaaataataataatattaataataataataataataataataatgaccaa
aaagataataagaaaagtactactaattcccctggtttaatcgatagactattaacttta
ctaaaaaaataa
DBGET
integrated database retrieval system
