Cavenderia fasciculata (cellular slime mold): DFA_06574
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Entry
DFA_06574 CDS
T02668
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosome protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_06574 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dfa00535
]
DFA_06574 (smc3)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
DFA_06574 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
DFA_06574 (smc3)
Proteoglycans [BR:
dfa00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
DFA_06574 (smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
GATA
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
14875916
NCBI-ProteinID:
XP_004362275
UniProt:
F4PJD8
LinkDB
All DBs
Position
Unknown
AA seq
1957 aa
AA seq
DB search
MDIIEDYMHHLNYFNNNNNNQQQQQSQSRLPTPPLPYSLDYKRMYNNNNNNNNQNNSINN
INNNYNNGNRLNPFQMVPHSPRDQIPMPPFSLSNHNFGNPISNPSHHHHQNPTYGMTSYP
TTTTSTPIIISNGTSTTTTNNNNTSSSSSLPSSTTTSPVTMVGRSSPTTLASTPLPISIS
PPPQLSSVRPLSSPAPSVVVDIRSQPYNSKLDITLSPKPIKLSTVIDSSFNSNNSFSSSS
SSQNIQSVKSEDLNNNNNNNNNNNINQTNNNNNNNFMTSTFKQSLPHGLYNMVESILPLC
QEIDTQKGASTDRTDNLNRLLKSLEDVSKKAKKLRKSRLPYAPKPEKSLEFVQVRPRRNR
KSKNAYKVNEDELVCCMCGTMETPEWRRGPDGCKSLCNACGLYFAKTKKKERDDFYNNVS
SSPPSSFGGSNTPTFGPVNTTSTTTTTSTTNTNNSTSPVNTPSSSSSSSNSVLNILNLIN
PTTTTTNHSTNHSTSDSDNMRGWYFQQINSSYKTTIKEANIEAIRVVFREKREYNTYHII
IMVFIKLIKIEGFKSYKHLDLSSTSFSPGFNVITGRNGSGKSNLFAAIRFLLGDWSNLSL
GKEERSKLLHSFGGTAVHSGYVEVLFDNSDGRFPIQKKEFTLKRSVFVNKDEYSLDGQAY
SKQDVKSLMESAGLSSSNPYYIVQQGQIAELASMGDKQRLDLLKEVAGAHVFEDRYSQSF
ELMKETRLKHDKIDQDLEYINERKEQLAQEVKQLEDYHRLRSEKKTLEAYIASMENIESE
KIIGDTESHRRKLNQDVETRAQELDSLHTSYRDESNKLVEINLALSSLKKQLDSSEKEYI
GHTKQRAKMEIDVKRLKENDNRYKKKAKDLHEELDRIKNSVKKIESDILEIEPNLQNLKL
IDKKDDEVVARNDIRLNELYVKQGMFHFANRAERDRYLNTEIKNMQKIVDDYTVQIGLVT
KEAESAEKLVAQKTSGVADREQGERQRRQQLEQVTKEADEQRKKKDVLHRQLKDLKKSIE
GETAKGKTLQEEFRRSESHMQSTLPRGIYEAIKEIRGQTGVFGALFSLINLVNPDDYRAV
EIVAGNALFHIVVDTDETASRLLQKFNNDKTSRLTFVPLNRISSRPSNLNVVPPDRNQPA
QYRSLLSQLEYDPRFEVAMQLVFGKTMLCDTPAVAEDLRRAHRVDCVTRAGDMLYGKGAM
VGGYHNSNKSRMLAYRQLCEWTEKVGEQQAAEKSTQKEIGKLEEQLKTADRLQETLEKRR
RTILAEIEALRSEDSTDVSLYEEIAVKKRQMQEKIETDARILKLKLDNYVGQKDSPFVTT
LTESERTELLQLSEKTIQLKEEKIKRAQEIVKLELESTQMKYQLKHNHLRRLQEIEQELY
VGDNTLAENARVIQERESELKEETQESQGIEEKLDSLRQEVDSNEQLQRDAKKRVDDIKK
NLEEKEGQLMEIASQLEQLAINLQMHSKNQSKSRAKVAAQSVNFDHLKLLSREDANEQLR
SINAQLRKSAGLNHRADEQYRSTSEVFESLNNRSKELKVSVNSIIDFMKTMEQKKEEAIA
RTYSDVARNFVQVFKELIPPGDAQLIMHRDGEGEDEKPSQWAADSQNRIATPLDLKFKGV
GIRVSFGKGHAPLTMHQLSGGQKTLVALALIFALQRTDPAPFYLLDEIDAALDHQYRISV
SRLIRKHSKFTQFIATTFGPEFVMDANQNWIVTFLKGASKLVPGSKADALNIIKQHDKAP
TLDFTYTGVPKEEEYIGPTVLGLAEDKHMVEIEYKRCKKRAMVAMQRAETACNEMLDIEQ
KLTTTATSSSESSTLSNLLIEKKRLFDRLHKKYLNCKKDYDESKANYVRLGGIIKTKEDE
KDGGGEKDVEMEDDSSMEQAADSKRTSPQPIGNIVSPQKPDIEEDLDEGSFSQRIEEVME
KVATFLPEPERGIKKSSDEDSDDDDDFSSDEEEEQKK
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggatatcatcgaagattatatgcaccacctaaactattttaataataataataacaat
caacaacaacaacaatcacaatctagattaccaacaccaccactaccatattcactagat
tacaaaagaatgtacaataataataataataataacaatcaaaataatagtattaataat
attaataataattacaacaatggaaatcgattaaatccattccaaatggtaccacattcg
ccacgtgatcaaattccgatgcctcctttttcgctgagtaaccacaattttggaaaccca
atttcaaacccatcccaccatcatcaccaaaacccaacctacggaatgacatcctatcct
acaactaccactagtacccccatcatcatttcaaacggcacctccaccaccaccaccaac
aacaacaacacaagtagctcatcatctttaccctcatctacaactacatcccctgtcaca
atggtgggtagaagcagtcctactacattggcatccactccattgcccatatcaatatct
ccaccaccacaattgtcgtctgtacgacccttatcgtcacctgctccttcagttgttgtc
gatattcgatcgcaaccctacaactcaaagttagatatcactctctcgcccaaaccaatc
aaactctctacagttattgattcaagcttcaattcaaacaattccttttcttcttcttct
tcttcacaaaatatccaaagtgttaaatcagaggatctcaacaataataataataataat
aacaataacaacatcaatcaaactaataataataacaacaacaattttatgacatcaaca
tttaaacaaagcctaccacatggtttgtataatatggtagagtcaatcttacctctatgt
caagaaatcgatactcaaaagggtgccagcactgaccgtaccgacaacctcaatcgtcta
ttgaaatcacttgaagatgtctccaaaaaggccaagaagcttagaaagtctagattacca
tacgcaccaaaacctgaaaaatcactagaatttgttcaagttagaccaagaagaaataga
aagagtaagaatgcatacaaagtaaatgaagatgaacttgtttgttgtatgtgtggtaca
atggaaacaccagaatggcgtagaggaccagatggatgcaagtcactatgcaatgcctgt
ggactttactttgccaaaaccaagaaaaaggaaagagatgatttttacaacaacgtatct
tcctctcctccatcatcttttggtggtagtaatacaccaacctttggtccagttaatacc
acctctactactactactacctctactaccaataccaacaactctaccagtcctgtcaat
actccctcttcctcctcttcgtcgtccaattcagttttgaatattctcaacctcattaat
ccaactactaccaccaccaatcattcaaccaatcattcaaccagcgatagtgataatatg
agaggttggtattttcaacaaatcaactcaagctataaaacaactattaaagaggcaaat
atcgaggcaattagagtagtatttagagagaaaagagaatacaatacctatcatatcatc
atcatggtatttattaaattaattaaaatagaaggatttaaatcctataaacatttagat
ttgtcttcaacttcttttagtcctggttttaatgttattactggaagaaatggatcagga
aagagtaatttatttgcagcgattagattcttacttggtgattggagtaatctatcattg
ggaaaggaagagagatctaaattacttcattcatttggtggaacagcagtacattctggt
tatgtagaggtattgtttgataatagcgatggtcgtttcccgatacaaaagaaagagttt
acattgaagcgttcagtgtttgtaaataaggatgaatactctctcgacggtcaagcatac
tcaaaacaagatgttaaatcgttgatggagagtgctggtctatctagtagcaatccatac
tatatcgttcaacaaggtcaaattgcagagttggcatcgatgggtgacaaacaacgtttg
gatctattaaaagaggtggctggtgcacacgtctttgaagatcgttactctcagtctttt
gaactcatgaaggaaacaagattaaagcatgacaagatcgatcaagatttggaatacatc
aacgaacgaaaggaacaacttgcacaagaagtcaaacaactagaagactatcatcgtctg
cgttctgaaaaaaagacattagaggcttatattgcatcgatggagaatatagagtcggaa
aagatcattggtgacactgaatctcatcgtcgtaaacttaatcaagatgtagagacacgt
gctcaagagctggacagtctacacactagttatcgtgacgaatcaaacaagttggtagag
attaatcttgcattgtcaagtctcaagaaacaattggattctagcgaaaaagaatatatt
ggtcacaccaaacaacgtgccaagatggagattgatgtaaagagactgaaagaaaatgat
aatcgttacaagaaaaaggcaaaggatctacatgaagagttggatcgtatcaaaaacagt
gtaaaaaagattgaaagtgatatcttggagattgaaccaaaccttcaaaaccttaaattg
atcgataaaaaggatgacgaagtggttgccagaaacgatattcgtctcaatgaactctat
gtcaaacagggtatgttccactttgccaatcgtgccgaacgtgatcgttacctcaacact
gaaattaaaaatatgcaaaagattgtggacgactataccgtacaaattggtttggtcacc
aaggaagcagagagtgctgaaaagttggtcgcccaaaagacaagtggtgtcgctgatcgt
gaacaaggtgaacgtcaacgtcgtcaacaattggaacaagtcaccaaagaggcagatgaa
caaagaaagaaaaaggatgtccttcatcgtcaactcaaagatctcaagaaaagtatcgaa
ggtgaaacggccaaaggaaagactttgcaagaagaatttagacgttcagagtctcacatg
caatctacccttccacgtggtatctatgaagcaatcaaagagattcgtggacaaactggt
gtatttggagcactcttttcacttatcaatcttgttaatccagatgattaccgtgcagtc
gaaattgttgctggtaatgcactctttcatatagttgtagataccgatgaaactgccagt
cgtctattgcaaaaattcaacaatgacaagacatctagactcacctttgtaccgctgaac
cgtatttcatctcgtccatcaaacctcaatgttgtcccacccgatcgtaatcaaccagct
caataccgttcattactctctcaactcgaatatgacccacgttttgaagtggccatgcaa
ttggttttcggaaagacaatgttgtgtgatacaccagctgttgcagaggacctacgtaga
gcacatcgtgtcgattgtgttacccgtgcaggtgacatgctctatggaaagggtgctatg
gttggtggttaccacaatagcaataaatctcgtatgttggcttaccgtcaactgtgcgag
tggactgaaaaggtcggcgaacaacaggccgctgaaaagtcaacacaaaaagagattggt
aaattagaagaacaactaaagactgccgatcgtctacaagaaacactagagaaacgtaga
agaaccattctagcagagattgaagcgttacgtagtgaagattcaacagacgtatcgctc
tatgaagaaattgctgtcaagaaacgtcaaatgcaagaaaagatagagaccgatgccaga
attctaaaattaaagttggacaattatgttggacaaaaggattcgccatttgtgacaaca
ctcaccgaaagcgaacgtaccgaactcttgcaactctctgaaaagactatacaactcaaa
gaggaaaagatcaagcgagcacaagaaattgtaaagttggaattggaatctactcaaatg
aaataccaactcaaacacaatcatcttcgtcgtcttcaagagattgagcaagaactctat
gttggtgataatactcttgctgaaaatgcacgtgtcattcaagaaagagaatcagagctc
aaggaagaaacgcaagaaagtcaaggaatagaagaaaaattagatagcttgcgacaagag
gttgatagtaacgagcaactacaaagagacgccaagaaacgtgtcgatgacattaagaaa
aatctagaagaaaaggaaggtcaattgatggagattgcctctcaactcgaacaattggcc
atcaaccttcaaatgcattccaagaaccaaagtaaaagtcgtgccaaggttgctgctcag
tctgtcaactttgaccatctcaaattattgtcacgtgaagatgccaacgagcaattgcgt
tccatcaacgcccagttgagaaaatcggcagggctcaaccatcgtgccgacgaacaatat
cgtagtacatcagaggtttttgaaagtctcaacaatcgttccaaggaactcaaggtatct
gtaaactctattatcgattttatgaagacaatggaacaaaaaaaagaagaagcaatcgct
cgtacctactctgatgtggccagaaactttgttcaagtatttaaagaactcatcccacct
ggtgatgcccaactcattatgcatcgtgacggagaaggagaggatgaaaagccatcacaa
tgggctgcagactcgcagaatcgtatcgccacaccattggatctcaaattcaaaggtgtt
ggcattcgtgtatcttttggcaagggtcacgccccactcaccatgcatcaactctctggt
ggtcaaaagacacttgttgccttggcactcatctttgctctccaacgtaccgatccagct
cccttttatcttctcgatgaaatcgatgccgccctcgatcatcaataccgtatcagtgtg
tcacgtctcattcgtaagcacagcaagtttacacagtttattgccactacttttggtcca
gagtttgtcatggatgccaatcaaaattggattgtcactttcctcaagggtgccagtaaa
ttggtgccaggtagcaaggcagatgccctcaacattatcaaacaacacgacaaggccccc
acattggatttcacctatactggtgtgcccaaggaggaagaatacattggtccaaccgtt
ctcggtcttgccgaagacaaacatatggtcgaaattgaatacaaacgttgcaagaagcgt
gcaatggttgccatgcaacgagcagaaactgcttgtaatgaaatgctcgacattgagcaa
aaacttaccaccactgccacctcgtcctctgaatcgtctacactctctaatctgctcatt
gaaaagaagagactatttgatagactacacaagaaatatttgaactgtaaaaaagactat
gatgaatccaaggccaattatgtacgtttgggtggtatcatcaaaacaaaggaagacgaa
aaggacggaggcggagaaaaagatgtggaaatggaagatgatagctcaatggaacaagcc
gccgacagcaagagaacctcacctcaaccaattggcaatattgtttcacctcaaaaacca
gacatagaagaggatttggacgaagggtcattctctcaacgtattgaagaagttatggaa
aaagttgcaacctttttaccagaaccagaaagaggtattaaaaaatcatcagatgaagat
agtgatgatgatgatgacttttcttcagatgaagaagaagaacaaaaaaaataa
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integrated database retrieval system
