Cavenderia fasciculata (cellular slime mold): DFA_07562
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Entry
DFA_07562 CDS
T02668
Name
(RefSeq) SAP DNA-binding domain-containing protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
dfa03015
mRNA surveillance pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_07562
09122 Translation
03013 Nucleocytoplasmic transport
DFA_07562
03015 mRNA surveillance pathway
DFA_07562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_07562
03041 Spliceosome [BR:
dfa03041
]
DFA_07562
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DFA_07562
Spliceosome [BR:
dfa03041
]
Complex C
Other components
EJC/TREX
DFA_07562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP
RSB_motif
Motif
Other DBs
NCBI-GeneID:
14871916
NCBI-ProteinID:
XP_004367421
UniProt:
F4PWS4
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MTIVPSKLKVTELREELDKRGIKTTGLLKAALVEKLEQVLKEEEEKGTTTTTATTTTEKQ
EDNKEKEEEQTNKDSNDNDNKVGGQEDADMKESSLDKPEAVAGDKKRKDMEKNDDDDNNK
NDSKVDQEEVEEPKQPSTKTKKLNEDDVDYAVDYSDSDSDVTTKKQSTTTTTTTKPTTST
TITSPTPTTTSTATNEKPLSSTTSTSTSTTSTTNTKTSSPSPSSSLSSSTNNTNTIQQET
RQSVPPSTRNITNILFIDKFVRPLKESACKDMLAETGNIVDFWMNNIKSYCYVSYTTEDE
AAKTREAVYGLVWPPQNRSPLTAEFVTQEEAEKVKSGSAQPKEAHPATFPASPVLPSNKT
KKQQPQTKPQQINNNNNNNTNANSNNNNTNNTNTSNIKKEKNINNNNNNNTNNNNNNNNN
NKPKEKQIDSRYTATKSTPIIHYRILTEDEVARRYRGPWDSAIKIRVNSTIQEAEDLYTK
LMNPDKLVRTPLPMEYNKLMTIHTEVMDIVNKTVAQMTGHLLDAQQLVDMTKSIKVRLCN
VEMTQSVNHHPEELNQIKITGGKLYDIIESFYKTKDQFIKLKGYTKDLKDSKELNAVLTL
QNRGMQQRKKEMEDTLVSQRIEFNDTVATLEKQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtaccttctaaactcaaagtaacagaactacgtgaagagttggacaagaga
ggaatcaaaaccactgggttattgaaagctgctctggttgaaaagctcgaacaagtactc
aaagaagaagaagagaaaggaactacaacaacaacagctaccactactacagagaaacaa
gaagataataaagagaaagaagaagaacaaacaaataaagatagcaatgacaatgacaac
aaggttggtggtcaagaagatgctgatatgaaagagtcatcattagataaaccagaagcg
gttgctggtgataaaaagagaaaggatatggaaaagaatgatgatgatgataataacaag
aacgattcaaaagtagatcaagaagaggtagaagaacctaaacaaccatcgactaaaaca
aaaaagttaaatgaagatgatgtagattatgctgtagattatagtgatagtgattcagat
gtcactactaagaaacaatcaactacaactacaactactactaaaccaacaacatcaaca
actataacttcaccaacaccaactactacatctactgcaactaatgaaaaaccattgtca
tcaactacctctacctctacctctactacatctacaaccaatacaaaaacatcatcgcca
tctccttcatcatctttatcatcatcaaccaacaacaccaacacaattcaacaagagaca
agacaatcagtaccaccaagtacacgtaatattaccaatatattgtttattgacaagttt
gtaagaccacttaaagagagtgcttgcaaagatatgttggcagagactggaaatattgtc
gatttttggatgaacaatattaaatcctattgttatgtttcctatacgacagaggatgaa
gctgccaagacaagagaggctgtctatggattggtgtggcctccacaaaacagatcaccc
ctcactgctgaatttgtcacacaggaggaggctgaaaaggtcaagagtggttctgcccaa
cctaaagaagctcatcctgccacctttcctgcatcacccgtcttaccatcaaacaaaaca
aagaaacaacaaccacaaacaaaaccacaacaaattaataataataataataataataca
aatgccaatagtaataataataataccaataacaccaatactagtaatattaaaaaagag
aaaaatattaataataataataataacaacaccaacaacaacaataataacaataataat
aacaaacccaaagagaaacaaattgatagtagatatacagccactaaatcaacaccaatt
attcattaccgtatattgacagaggatgaagttgcacgaagatatagaggtccttgggat
agtgctattaaaattagagtgaattctactattcaagaggctgaagatttatacactaaa
ttgatgaaccctgataaattggttagaactcctctaccgatggaatataacaaactcatg
actatacatacagaggtgatggatattgtaaacaagacggttgcccaaatgactggtcat
ttgttggatgctcaacaattggttgatatgactaagtcgatcaaggtgaggttatgcaac
gttgaaatgacacagagtgtcaaccaccaccctgaagagctcaatcaaattaaaatcaca
ggtggtaaactatacgatatcattgaatccttctacaaaaccaaagatcaatttataaag
ctaaaagggtacactaaagatctcaaagattcaaaagagttgaatgcagtgctcacattg
caaaatcgtggcatgcaacaaagaaaaaaagaaatggaggatacgttggtcagccaaaga
atagagtttaacgataccgtcgcaactttggagaaacaatag
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