Cavenderia fasciculata (cellular slime mold): DFA_08521
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Entry
DFA_08521 CDS
T02668
Symbol
spt5
Name
(RefSeq) transcription initiation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DFA_08521 (spt5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_08521 (spt5)
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_08521 (spt5)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DFA_08521 (spt5)
RNA polymerase I system
DFA_08521 (spt5)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
DFA_08521 (spt5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
DUF2187
SH3_2
Motif
Other DBs
NCBI-GeneID:
14868730
NCBI-ProteinID:
XP_004356009
UniProt:
F4Q2Q8
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MSDDEVHSDDRDDDDLGSDDDGVDFQSEDENYSDQEEEEEEEIIQKHKKSKSSSSSSSSS
RSSSKQKKKPTQRKRGASDYFEDEADEADEDEEEEEGEEGYEAMLEQGRQRHEQRRREAE
DFDKRRDNRTQAEIEAELEQKANRYEEEADGYVEDEEYMGDAGLPNQSYWRIKCRPGEEK
QFAASIMQKFFATQGTPDKILIKSVLAPPHIQGQIYIEAEREMHVKHAIRGMPQIIYSGM
MMIPLKDMIEILNRPRKSTDLSRGTWVRVRLGKYKDDLGQIWDYDSERGRCSVKLIPRID
LTVTPKGDDKDENGEKKSPFKRKAGLRPPQRFFNAKEMSDVQSISKKKIFGETFTIYNNE
KYKNGFIYKVMRIKSIVSDGVTPSLEELQKFQDRKENDDYNNDDEEDDDIAMDGSSSSAF
GLLDASVIPKLSTSTIQFTKGDTVKVIEGDLKGLMGKVESIDDKSVIILPIHDGLNEPLV
FPPSELQKYFKIGDHVKVITGRYEGETGLVMRVEDMTAYVLSDMNLGELKVRQQDLQGCT
QVSEGRLELGNYELHDLVQYGPQKIGIIVKVERDSFKILDETMNVSTVKLQEVLNKRNLR
NATTTDSQSNSLVVNDAVEIVDGPYRGKQGSILRISRNFLFLKSKDVYENGGIFVVRANY
STLSGAKNRVGQGYGQQQQQQQQQQSFNNGGGGRGGRGGFGGGAGGGRGGRAGGRGGPDS
PLNKTVTITKGNWKGYAGTVKECTETHVQIELQAKPKRITVPRGDILMEGARQQQDQWDQ
QQQMQLAYASRTPMREENPGMTPMRTPMRSNNNSGHHDPWSSSATPMRSTGSSNWYSDDM
PSHGSGSSGGHQSNNSNNNNNNNNNNNNNDWSTPQTSYSNFSPFNPSTPGSDMHNRHDYT
TPISIPTPQSYETPTPSNYHYDQQTPLDVPQSPFTPHAPQTPATPSTPSTNEDQEDEIDN
SPWQGIGFQVTYKANGDLGVVTTNSNGFCSVDFLSTNKKMSNIAQSELELVVPSKKELVV
ILRGPHATQTGSLFVITTAQSYSSGIVKMDTNLDFKVLKMANLGKLNNQEPK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgatgaagtacattctgatgatcgtgacgatgatgatttaggttccgacgat
gatggagtagatttccaatctgaagacgagaattactcggatcaagaagaagaagaggaa
gaggagattatacaaaaacataagaagagtaaatcgtcgtcgtcatcgtcatcatcatca
agatcatcatcaaaacaaaagaaaaaaccaacacaaagaaaacgtggagcatcagattac
tttgaagatgaggccgatgaagccgacgaagacgaagaggaagaggaaggtgaagaaggc
tatgaagccatgctcgagcaaggtcgtcaacgacacgaacagagacgtcgtgaagctgaa
gactttgacaagcgtagagacaaccgtacacaagccgagattgaagccgaactcgaacaa
aaggccaatcgttatgaagaggaagccgatggctacgtcgaagacgaagaatatatgggt
gacgcaggtctccccaaccaaagctactggagaatcaagtgtcgtccaggcgaggagaag
caatttgctgcatcgatcatgcaaaagttctttgccacgcaaggcacacccgacaagatc
ctcatcaagtcagtgttggcaccaccccacattcaaggtcagatctatatagaagcagag
cgtgagatgcatgtcaagcacgcaatcagaggtatgccacagatcatctactcgggcatg
atgatgatccccctcaaagatatgatagagatcctcaacagacctcgcaagtctaccgat
ctcagtcgtggtacatgggtacgtgtcagacttggtaaatacaaggacgatcttggtcaa
atttgggattatgattccgaacgtggtagatgttcagttaaactcatcccaagaatcgat
ttaactgttactccaaaaggtgatgataaagatgaaaatggtgaaaagaaatcaccattt
aaaagaaaagcaggacttagaccaccacaaagattctttaatgcaaaggaaatgtcagat
gttcaatcaatttcaaagaagaagatatttggagagacgtttaccatatacaacaatgaa
aaatataagaatggattcatctacaaggtgatgagaatcaagagtatcgtatcggatggt
gtaacaccatcgttggaagagttacagaaattccaagacagaaaggaaaacgatgactat
aataacgacgacgaggaagatgacgacattgcaatggacggttcatcttcttcggcattt
ggtctactcgatgcaagtgtcattccaaaattatcaaccagtaccatccaatttacaaag
ggtgatactgtcaaagttatcgaaggtgatcttaaaggtctcatgggtaaagttgaatca
atcgatgataaatctgttatcattttaccaattcatgatggtttaaatgaaccattagta
tttccaccatcagaattacaaaaatatttcaagattggtgatcatgtcaaagttattact
ggtcgttatgaaggtgaaactggtttggttatgagagtggaagatatgacagcatatgta
ttatcagatatgaatcttggtgaactcaaagtacgtcaacaagatctccaaggttgtact
caagtgtcagagggtagattggaattgggaaattatgaattacatgatttggttcaatac
ggaccacaaaaaataggtataattgtaaaagtagaaagagactcttttaagattttggat
gaaacaatgaatgtctcgactgtaaaacttcaagaagtattaaacaagagaaatttaaga
aatgctacaaccacagattcacaatccaattcattggttgtaaatgatgctgttgaaatt
gttgatggaccatatagaggaaaacaaggatcaattttaagaatatcaagaaacttttta
ttcttaaagagtaaagatgtatatgaaaatggaggtatatttgttgtaagagccaactat
agtacattgagtggtgcaaagaatagagtgggacaaggttatggacaacaacaacagcaa
caacaacaacaacaatcatttaataatggaggtggtggaagaggtggaagaggaggcttt
ggaggtggagctggaggaggacgtggtggacgagctggtggacgtggtggacctgatagc
ccgctcaacaagacagtcaccattaccaagggtaactggaagggttacgctggaacagtc
aaagaatgtactgaaacacatgtccagatcgagttacaggccaaaccaaagagaatcact
gtgccacgtggtgatatcctcatggagggcgctcgtcaacaacaagaccaatgggatcaa
caacaacagatgcaattggcctatgccagtcgtacaccaatgcgtgaggagaatccaggt
atgacacctatgcgtacaccaatgcgttccaacaacaacagcggtcatcacgacccttgg
tcgagctcggctacacccatgcgttcaactgggtcgtccaactggtactctgacgacatg
ccatcacacggcagtggttccagtggtggtcaccaatccaacaactcgaacaacaataac
aacaataacaacaacaataacaataatgattggtcgactccccaaacatcgtattccaac
ttttcgccattcaacccgtccaccccaggttctgatatgcacaatcgacacgactacacc
acacccatcagcattccaaccccacagagctacgaaacacccacaccgtccaactaccac
tacgaccagcagaccccgctcgacgtgccacaaagtccgttcacgccacacgctccacag
acacctgccacgccaagcaccccatccaccaacgaagaccaagaagacgagattgacaac
tcgccatggcaaggaatcggcttccaggtcacctacaaggccaacggcgacttgggtgtc
gtcacaaccaacagcaacggtttctgcagtgtcgatttcctcagcaccaacaagaaaatg
tccaacattgcccaatcggaactcgaactcgtcgttccatccaaaaaggaactcgtcgtt
atcttgcgtggtccacatgcaactcaaacaggcagtttgtttgttatcaccactgctcaa
tcctattcatctggtatcgtcaagatggataccaatctagatttcaaggtacttaaaatg
gctaatcttggtaaattaaataatcaagaaccaaagtaa
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integrated database retrieval system
