Cavenderia fasciculata (cellular slime mold): DFA_11237
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Entry
DFA_11237 CDS
T02668
Name
(RefSeq) putative CCR4-NOT complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DFA_11237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_11237
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DFA_11237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
Motif
Other DBs
NCBI-GeneID:
14866357
NCBI-ProteinID:
XP_004350180
UniProt:
F4QFM3
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MEEIQNLAIRAATHFNKAEYDKASQLFLELKQKTTNNKEVLMNLSISDYYQRSCSNPAKL
LDELSSLYKATLVKDKQQQQSDSKDKDKDVGSSSPTSDLSPNTSPVLTAQQSNKSAATDS
PSSTSPPPPTASLSSPTTTTESSSSSSSSSTSSTSIDSEQAILLYNQAVLLHATKQHGSA
YEHLELLYQNMLFLDDYIAIRVCLLMINVAITVQMYDKAYSVLLNLEQSFSHLYYNNKDV
PPTIDDDDNNNNNNNNNNNNNNNNNNNNNNNNNLSSSSSSTTTSFESSSAAAAENWANTM
MTPIEFRFIIHVYKAKLYLLSNSNDYLYLAKEEIKNAISKGVKINYKLLPSCHLLKANYY
NNLGSNTSKMVQFLNLSKDGINETPNEPTTPPTTTTTNVAPPPTTTSTKAKNSKQQKQQQ
QQQQQQQQQQQQQLQQQQINPLSFGVDLFIEDITPQIYFNNLGCLHFDLHKYTSSIFYFT
KALKSSTPTTTSTTPSNNNNNGKSSNNSSSSAANITVDPKSIEHDKRTEIFYNTGSLLLL
TGKPELAFSCIQEACLLLHNNPLVWLRLAECCIMAHVQRCREDDKSNQTNSIQVFDKDDQ
YNKRILLPNQSGLHKGLQIEDSDVHSTLVDENDESSRLGTLSLEFAAKCLRNSYYIQKKV
LKQCKINNNNQNNPKKSAASAVSSSSSTNNNNSNPSTTSSPPSSSTSTMPSTTSNNIPSG
VDLYHQNAIELMLSILSSQAYIALCTCNPVVSLTASKEMLAICNEYPTGQYDKHKFYAHL
YAAESCIMLNAPDEAISFLPPQFIDSIGSSGAVGGGGGLSMGGAASSVNSPLSTSDYQNI
FYTNLAIAYLVKDNIQDALKCIETILNDKQNNNNNNNNNNSSSSNNSMMNDFDGKLILLQ
VYIEVRAGRKLSALSILSKQRPVPIIFSS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatacagaacttggcgattagagcagcaacgcatttcaacaaggccgagtat
gacaaggcgtcacagttgtttttggagctcaagcaaaagacgacaaacaataaagaggtg
ttgatgaacctgtcgatatcagattactatcagcgtagttgcagcaaccctgctaaacta
ctcgacgaactatcgtcactctataaagctacattggtcaaagacaagcaacaacaacaa
tcagacagtaaagacaaagacaaagatgtcggatcgtcatctccaacatccgacctatca
cccaacacatcaccagtattaactgctcagcagtcaaacaaatctgctgctactgattct
ccatcctctacctctccacctccaccaactgcttcattgtcatctcctacaactacaact
gaatcatcatcatcatcatcatcatcatcaacatcatcaacatcaattgatagtgaacaa
gccattcttttatacaatcaagctgtgttattacatgcgactaaacaacatggatctgca
tatgaacatttagaattactctaccaaaatatgttgtttctagacgactatattgccatt
cgtgtctgtttgttgatgatcaatgtagccatcaccgtgcaaatgtacgacaaggcatat
tcggtacttctcaacctcgaacaaagcttttcacatctatactacaacaataaggatgta
ccaccgactattgatgacgatgacaataataataataataataataataataataataat
aataataataataataataataataataataataataatctctcatcctcttcttcttct
actactacctcttttgaatcatcatctgctgctgctgctgaaaattgggcaaacacaatg
atgacaccaatcgaatttagattcatcattcatgtttataaagccaaactatatctcctt
tcaaattcaaatgattatctttatcttgccaaagaagaaattaaaaatgcaatttcaaaa
ggtgtaaagattaattacaagttattaccatcatgtcatttattaaaagcaaattattat
aataaccttggatcaaatacaagcaagatggttcaatttttaaatctttcaaaggatggt
atcaatgaaaccccaaatgaaccaactactcctccaactacaactacaacaaatgtcgct
cctcctccaactacaacgtcgacaaaagcaaagaattcaaaacaacaaaaacaacaacaa
caacaacaacagcagcaacaacaacaacaacaacaacaattgcagcagcaacaaattaat
ccattatcatttggagttgatttatttattgaagatattacaccacaaatttattttaat
aatcttggttgtttacattttgatttacataaatatacatcatcaatattttattttaca
aaggcattaaaatcttcaactccaacaactacttcaacaacaccttcaaataataataat
aatggcaaatcatctaataattcatcttcatcggcagcaaatataacagttgatccaaaa
tcaattgaacatgacaagagaacagaaatattttataatactggatcattattattgttg
actggaaaaccagaattggcattttcatgtattcaagaagcttgtttacttttacacaac
aatccattggtttggttacgattggctgaatgttgtatcatggcacatgtccaaagatgt
cgagaggatgacaaatcaaatcaaacaaactcgattcaagtgtttgataaagatgatcaa
tacaacaaacgtatcctattaccaaatcaatcaggtcttcataaaggtttacaaattgaa
gatagtgatgttcattcaactttagttgatgaaaatgatgaatcaagtaggttaggtaca
ttatcattggaatttgcagccaaatgtttaagaaattcatattacatccaaaagaaagtt
ttaaaacaatgtaaaatcaataataataatcaaaataatccaaagaaatctgctgcctct
gctgtatcttcttcctctagtacaaataataataatagtaatccatcaactacatcttct
ccaccatcatcatctacatctactatgccatcaacaacttccaataatataccatcggga
gttgatttataccaccaaaacgccattgaattaatgttgtccattttgtcatcacaagca
tacattgcattgtgtacttgcaacccagtggtgtcacttacagcctccaaggaaatgttg
gctatttgcaatgaatatccaaccggtcaatacgataaacacaaattctacgctcattta
tatgcagctgaatcatgcatcatgttgaatgctccagatgaagcaatctcattcctacca
ccacaattcatagattcaattggtagtagtggagctgtaggaggaggaggaggtttgtca
atgggtggtgctgcaagtagtgtaaactctccactcagtacatcagactatcaaaatata
ttctataccaatcttgcgattgcctatcttgtcaaagataatatccaagatgcattaaaa
tgtatagaaaccattttaaatgataaacaaaataataataataataataacaataataat
agtagtagtagtaataatagtatgatgaatgatttcgatggtaaacttatattattacaa
gtgtatatagaagtaagagcaggtagaaaattaagcgcactttcaatattatcaaaacaa
agaccggtaccaattatattttcttcttaa
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