Cavenderia fasciculata (cellular slime mold): DFA_11376
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Entry
DFA_11376 CDS
T02668
Symbol
upf1
Name
(RefSeq) helicase
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
UvrD-helicase
SLFN-g3_helicase
Viral_helicase1
DEAD
AAA_16
AAA_22
AAA_32
AAA_5
nSTAND3
AAA
Motif
Other DBs
NCBI-GeneID:
14865482
NCBI-ProteinID:
XP_004350319
UniProt:
F4QCN3
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MYGLSQDISHGNNNNNNNNNNNNNNNNRNLEAKPSSGESQDFNYLDFDSTSQSSQDDHLE
RAIGGPFHGAVIERHGLYVGPPKNNHPDYNNHNNHNNNNKSPISSKSPSTPIHHTSRTVE
THIATTQSSQNFSQTFHPSSGHGGHHHGHGGGGDFLSSQNGSVPMSQLTFEDPEDLDTIQ
VDLPPHACRYCGLHDPLTVVRCSNSSCGKWFCNGRGKTSSAHIVNHLVKAKHNEISLHSD
SPFGDAVLECYNCGCRNIFLLGFIPAKTESVVILLCRDPCAMASSKDNPNWDLSKWVPLV
NGGDRHFLSWLVKVPSENDQERARQISMIQIAKLEEDWKVDPNATLLEVEHHGAETTLLP
TLLRYEDAYQYQEIITPLIKMESDYEKLMRESLTQDDVNIRWEQGLSKSKWFAQFSFSRS
DFEFKVVVGDELKVSFKGDRDYPEPWESSGRITRIDEESEASMEITLELYNHNPPNKSKS
KFKIDMVWRSTSFDRILIALKAFAIKQDAISSYLYHALLGHQPDATKVKVTVPQPTNFVL
PGLPPLNASQISAACSVLKSPLSLIQGPPGTGKTLVSAFLVHHLVNHGIKGKEKLLVCAP
SNVAIDQLAGKLHSVGLKVVRLCSKLREEVSSPVENLTLHHQVAQLDQYGKGVLRKFKAL
REETGELNPEDERKFLVLKGSLERNILKEADVICTTCVGAGDPRLRDIKFPYVLIDEATQ
ASEPECLIPLVLGARQVVLVGDHCQLGPVLLCKKVQEAGLSLSLFERLIHLGHHPFRLTT
QYRMHPALSEFPSNTFYEGQLVNEISYRDRVTNNGFVWPHPNRPMFFHNSTGHEEISSSG
TSFINRTEATLCEKIVTRFLELGTKPSQIGIITPYEGQRSFLVNNMQRTGRLPSDLYKEI
EVASVDSFQGREKDFIILSCVRSNENQGIGFLQDPRRLNVALTRARYGLIILGNARVLSR
DLLWNNLISHFKANEVLVEGGLQNLKQSSVVLQKPRKIHGEGKLPVAGAVMFTPGDLKPH
QIDPQYAQNMVYGQRPPKYYQPPSGGGGGGFYPSMGGYPQNAGGGPRGMPSSGGPSQSYN
STQRLTQNMNNMSLRYDGSQSINGFSQQSSSSSSSQQSSQNAPGYYMPMSQSFSLSLNEL
SQDYPNNQNNNNNNNDQQNSKK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtatggattatcacaagatatatcccatgggaataataacaacaataacaataataac
aataataacaataataataatagaaatctagaggcaaaaccatcgagtggagaaagtcaa
gatttcaactatctagactttgattctaccagtcaaagttctcaagatgatcatctagaa
agagctattggtggtccatttcatggtgcggttatagaaaggcatggactatatgtagga
ccacccaaaaacaatcatcccgattataataatcataataatcataataataataataag
tcaccaatatcatcaaaatcaccttcaacaccaattcatcatacatcgagaacagtagag
actcatattgcaacgacacaatcgtcacaaaacttttctcaaacctttcatccaagtagt
ggacatggtggtcatcatcatggacatggtggcggaggtgatttcttgtcttcacaaaat
ggaagtgttccaatgtctcagctgacatttgaggatcccgaagatttggatacgatccaa
gtcgatcttccaccacacgcatgtcgatactgtggattacacgacccgttgacagtggtg
cgttgctccaattcgtcgtgtggcaaatggttttgtaatggaagaggcaagacgtcgtcg
gcacacattgtcaaccatcttgtcaaggcaaagcacaatgaaatctcattacatagcgac
agtccgtttggcgatgcagtactcgagtgctacaactgcggctgtcgaaacatctttctt
ctcggctttatccccgccaagaccgagtcggttgtcatcctattgtgtcgtgacccatgt
gcaatggcatcgtccaaggacaaccccaattgggatctctccaaatgggtgccactcgtc
aatggaggtgatcgtcactttttgtcgtggttggttaaagtaccatcagagaatgaccaa
gaacgtgcccgtcaaatttcaatgatccagattgccaagctcgaagaggactggaaggtc
gaccccaacgccaccctgctcgaagtcgagcaccacggcgctgaaaccaccctcctaccc
acactccttcgttatgaagacgcctaccaatatcaagaaatcatcacaccactcattaaa
atggaatcagactatgagaaattaatgcgtgaatctcttactcaagatgatgtaaatatt
cgttgggaacaaggtctaagtaaaagtaaatggtttgctcaattttctttttctcgttct
gattttgaatttaaagtagtagttggagatgaattaaaagttagttttaaaggagataga
gattatccagaaccatgggaatcatctggtagaattacaagaatcgatgaagagagtgaa
gcaagtatggagattacattagagttgtacaatcataatccacccaacaaatcaaagtct
aaattcaagattgatatggtgtggagatcgacttcatttgatagaattcttattgctcta
aaggcatttgctatcaagcaagatgctatatctagttatctctatcatgcacttttaggt
catcaacccgatgccaccaaggtcaaggtgactgttccacaaccaaccaattttgtgttg
cccggtctcccaccattgaacgcatcacaaatatcggctgcttgctcggtattgaaatca
ccactttctcttatccaaggtccaccaggcactggaaagacgttggtatcggcattcctc
gtgcatcatcttgtcaaccacggcatcaagggtaaggaaaagctgttggtgtgtgctcca
tccaacgttgctatcgaccagcttgctggcaagttgcactcggtcggactcaaggtcgtc
cgtctctgcagcaagttgcgtgaggaggtgtcttcgcctgtcgagaatctcaccttgcat
caccaggttgctcaactcgaccagtatggaaagggtgtgttgcgcaagttcaaggcgttg
cgtgaggagactggcgagttgaatccagaagacgagcgtaagtttttggttctcaaggga
tcgctagagcgtaatatcctcaaagaggcagatgtcatttgcacaacgtgtgtcggtgct
ggtgacccacgtttgagggatatcaagttcccgtatgtcttgattgatgaagctactcag
gcatccgagccagagtgtctcattccattggtattgggtgcaagacaagtcgtgttggtc
ggtgatcattgtcaattgggtccagtactactctgtaaaaaggttcaagaagccggtttg
tcattatcgctgtttgaacgtcttattcatctcggtcaccacccattccgtctcactaca
cagtatcgtatgcatcctgcactcagcgagttcccttccaatacattctacgaaggtcag
ttggttaatgaaatatcgtatcgtgaccgtgtcaccaacaatggttttgtgtggccacat
cccaaccgtcctatgtttttccataactctactggacacgaagaaatctcgtcgtcaggt
acctcctttatcaaccgtaccgaagctacactatgcgaaaagattgtcacccgtttcctc
gaactcggtaccaaaccctcgcaaattggtatcatcacaccctatgaaggccagcgttcg
ttcctcgtcaacaatatgcaacgtaccggtcgtctcccaagcgacctgtacaaagagatt
gaagtagccagtgtcgactctttccaaggtcgtgaaaaagactttatcatcctctcgtgt
gtccgttccaacgagaatcaaggtattggtttcctccaagacccacgtcgtctcaacgtc
gctctcacccgtgctcgttacggtctcatcatcctcggtaatgctcgtgtcctctcacgt
gaccttctctggaacaacctcatctctcatttcaaggccaacgaggttttggtcgagggt
ggtttgcagaatctcaagcagagcagtgtcgtcctccaaaagccaagaaagatccacggt
gagggtaagctcccagttgccggtgccgtcatgtttacacctggtgacctcaagccacac
caaatcgacccacaatacgcacaaaatatggtctatggtcaaagaccaccaaaatactat
caacctccctctggtggtggcggcggtggtttctatccatctatgggtggatacccacaa
aatgctggtggtggtccacgtggaatgccctcttcaggtggtccaagtcaatcctataat
tcgactcaacgtcttactcaaaacatgaacaacatgtctcttcgttatgacggatctcaa
tcaatcaatggtttcagtcaacaatcctcctcctcttcttcttcacaacaatcatcacaa
aatgctcctggttattacatgccaatgagtcaatcatttagtttaagtttaaatgaatta
tctcaagattatccaaataatcaaaataataacaataataataatgatcaacaaaatagt
aaaaaataa
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integrated database retrieval system
