KEGG   Cavenderia fasciculata (cellular slime mold): DFA_11387
Entry
DFA_11387         CDS       T02668                                 
Name
(RefSeq) hypothetical protein
  KO
K15180  negative elongation factor B
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    DFA_11387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dfa03021]
    DFA_11387
Transcription machinery [BR:dfa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     DFA_11387
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 14865629
NCBI-ProteinID: XP_004350330
UniProt: F4QCP4
LinkDB
Position
Unknown
AA seq 757 aa
MEEYLIGDSGSDKILNSLSRTTQPIQFLDDFQKQYVQPALKLLDLHQIGRSNLYSQLLSF
LSDDLLVRVKSMHPNEMEALLDQSFPYISFDELKGIPMNVMKLMPEVPYRFLKKLSETPE
LYEQCPIEVKRQIWLINETLFREKLLPLIMQYVDDPYLFHELNEMIVETHVLPSKRRENN
TILKEIASLIGKSLKLYNGAISFIRQLFTELENVAALCTLRADLLMLFHDNGVSEIYDHD
RAHSIAWCVDACMRENIVDLRRVKEIQGYFQEIGNHGGVVLADIAMVFANPFALHCLLRN
VLMQLTEVVRRKQVPKEDENIKYITFLMTLATRSHEMVREQKYKIPHVKKQVFNNFYPIV
AAQLVDDYNREREAIRQASIPPPTAADAPQASVSAIPASTGSSIILTTTSTVTTPQQKSD
KIELDEVDDVDLNLPSLFLNNSLCKKILFTYIIKKVSDRDTLVVYKYLRFISQNDHDEEG
LSVLIGETSFIQSLVTQVLTAKDPKISFIVVEEFLLKYKHIPFILKQILRYLLESYSRLN
QREFSIIVQRLFTIDSQQQTLSNYTTKMVDELTSMTKTFLDKAGTRLNDRNVPLLLDFIK
MLAAQKPSSLTIVIPPPSHDNEEDADDDNDFESSMDVDVGGSLTNSSSNVALVSSPTNKN
IQNSPTNVTTPIRGPSFLDTNTNTNTNTNTSTTNTTPPATSTTTTTSTTTTNTSATSSTP
PVSSSSSSSSSSSSSSSTSNTIINNNSPTEDILNLID
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggaggaatatttaataggtgattcagggtctgataagatcttgaattcactgagtaga
acgactcaacctattcaattcttggatgactttcagaaacaatatgttcaaccagcttta
aagttattagatttacaccaaatcggtagaagtaatctatactctcaattactttcattt
ctaagtgatgatttattggttagagttaaatcaatgcatcctaatgaaatggaagcatta
ttagatcaatcatttccatatattagttttgatgaattaaagggtatacctatgaacgtt
atgaagttaatgcctgaagtaccttatagattcttaaagaaattatccgaaactcctgaa
ttatatgaacaatgtccaatcgaagttaaaagacaaatatggttaattaatgaaacatta
tttagagagaaattgttaccattgatcatgcaatatgtagacgatccttatttgtttcat
gaattgaatgaaatgattgtcgagacacatgtcttgccctcaaagagacgtgaaaacaat
acaatcctcaaagagattgcatcgttgattggaaagtcactgaaactgtacaacggagcc
atatcatttatcagacaactgtttaccgagctcgagaatgtcgcagcactgtgcaccctt
cgtgcagacctgttgatgttgttccacgacaatggagtatcagagatatacgaccacgac
cgtgcacatagcattgcttggtgcgtcgacgcgtgcatgagagagaatatagtggatttg
cgtcgtgtcaaggagatacaaggatactttcaagagattggtaatcacggtggcgtggta
ctggccgatattgcaatggtgtttgctaatccgtttgcattacactgtctgcttcgaaac
gtgttgatgcagctcaccgaggtggtcagaagaaaacaggtgcccaaggaagacgaaaac
atcaaatacataacattcctaatgacactggcaacacggtcacatgaaatggtcagagaa
cagaaatacaaaataccgcatgtcaagaaacaggtatttaacaacttttatcccatcgtt
gcagcacagctagtcgatgattacaacagagaacgtgaggctattagacaagcttccatc
cctcccccaacagctgcagacgcacctcaagcatccgtctctgccattccagcctccact
gggtcatctatcatccttacaactacttctacagtaacaacgccacaacaaaaatcagat
aaaatagaattggatgaagttgatgatgtagatctaaatttaccatcactatttttgaat
aattctttatgtaaaaaaattttatttacttatattattaaaaaagtatcggatagggat
acattggtagtttataaatatctaagatttatttcgcaaaatgatcacgatgaagaagga
ttgagtgtattaataggagagacatcgtttattcaatctttggtgacccaagtattgaca
gccaaggatccaaaaatatcatttatcgtagtagaagaatttcttttaaaatataaacat
attccatttattttaaaacaaatattaagatatttattagaaagttattcaagattaaat
caaagagaatttagtattattgttcaaagattatttacaattgattcacaacaacaaaca
ttatcaaattatacaacgaaaatggtagatgaattgacttcaatgaccaaaacatttttg
gacaaggctggaacacgtctaaacgatcgaaatgtgccattacttttggattttataaag
atgttggcagcacaaaaaccatcgtcgcttaccattgtcataccaccaccttcacatgac
aatgaggaagatgccgacgatgacaatgactttgaatcatcgatggacgttgacgtgggt
ggttctctaacaaattctagttcaaatgttgcattggtatcaagtccaacaaacaaaaat
atacaaaatagtccaaccaatgtaactactccaattagaggaccaagttttttagatacc
aataccaatacaaataccaataccaatactagtaccaccaatactactcccccagcaaca
tcaacaacaactactacatcaactacaaccactaatacttctgcaacatcttctactcct
ccagtctcttcttcttcttcttcatcatcttcttcatcttcttcatcgtctacttcaaat
acaataatcaataataatagtccaacagaagatatactcaacctaattgactaa

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