Cavenderia fasciculata (cellular slime mold): DFA_12154
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Entry
DFA_12154 CDS
T02668
Symbol
dhx57
Name
(RefSeq) DEAD/DEAH box helicase
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DFA_12154 (dhx57)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DFA_12154 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
RWD
HA2_C
AAA_22
HA2_N
DND1_DSRM
nSTAND3
AAA_19
ATPase
T2SSE
AAA_29
AAA_16
AAA_23
dsRBD2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
14866134
NCBI-ProteinID:
XP_004353791
UniProt:
F4QCA1
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MSSKKVPSQTTSSSKSGAKDNNNNNNNNNNNNSKDKKGSSSAAAPAAKVDSKGKPIKVDD
AKKKEQEAAAAAAASTKTRKDGSTPQQPAPAEPPKPRWTGKLPVQYLNEYCQKNQMNRPV
FEEMRFHFKGQQQFKFKVTLAFEGKKKQMTYKSYQPPHGSPAVMDAKAYAALVALHDLCG
NTTIYKLFPPEFTPFWMSLAEVAKVEQEQIQKEMEQQLAIEARRKEREPKHTQQIPSIVM
SDEAIRTIHSLTKQMNLRLEGENELDNNSSNSSTMSGEELNKREKEIVGKSLEELGFEQQ
DIENAFQRVKDITNLTNLISWLCLNVKDDTLPVAFRPKNLGIQKKSKTSTTTQIDSTSST
TNVHIIDARDRLIDLGWLPNEIDKVIDSSLESLVKDNQDAFARCWYRLLGLQDESFDTDV
VADDETCQEQREMEIEALRSIYGDSIKVISPQTYQITLDVGVLEVYLPGWCKYPFQPPVL
ILKPLTKSKWNKKGSYVICKEMVKQCQEFIGSPVLFNIINWCSTTDLPQIIANSKDEESA
AAEESNHNNNNIDKNVLLGTSSTSSSTGKKQSQQPRQTLGSIKSDDRINQDLLQSYKTSL
SNTSYTPVKKIRESLPVYSKKQQFIDLLERNQIVVVTGETGSGKSTQIPQYIMESFVKNG
KGSNCNIICTQPRRISAIGVADRVSFEWSGGQKDQTGQHVGYQIRNESKRSRNTRLLFCT
TGILLRMMVGGERGDMLSGVSHIIVDEVHERSVDNDFLLIILRALVKKRRDLKVILMSAT
LDAELIANYFSIKKDSIFAVAGFTHPVSHVYLEDSIRMIDYKPSVFLKKQKDSEESGESE
DGTSTTSTTSTSDSVKDILYHMDANLKQKRINAEFIEKLLIYLARQELGKRKSILVFVPG
MGDILNICDRLNNCSMSSSMWVLPLHSSLTPKDQQRVFERAPADRVKIVVATNIAETSIT
IDDVSIVVDTGRANQVNYNPITKNSMMGESFVSKAAIRQRAGRAGRTSAGTCYHLYTRAM
ESQFDDQETPEILRTPLQQLCLHVKLFQTDMNNTAAGGKVNKIESFLSNAIQPPSTESIK
AAIEELESVNAIEVQDGGERLTPLGYHLAQLPVDIYIGKMLLFGCIFRCIDPILTIAATL
SYKTPFISGADKRDKPQVKYGHGLQSDHFTFAIAYDHWRKAIKDGNEFSFCKENGLALST
LKTIQDLKIQFAEILSEIGFLPSNITQRSIQKEQKLNRGSDGIVESVGALFNSNGGDQKI
LKSVLCAGMYPKIGRIDVPPTTYVSTAGGAIANKHDPMNLKILTKRKATPQELKEMHEQY
INSHAGGKDAKNSDKFKHGYKKERIFLHPRSINFDEGEYTSPFIVYHDKVQTSRLFAHHT
TCVSSLTLLMFSIGGKVEIDSTFQHIILDQWIKFKSSGKVLAMIREIRLMLDKLLELKIK
DPSFDTSTSVVIDIITKIVKKEGYL
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaagaaagtaccatctcagacgacttcgtcgtcgaaatcaggagcaaaggat
aataataataataataataacaataacaataacaacagcaaggacaagaagggatcatct
tcagcagcagcaccagcagcaaaagttgattcaaaaggtaaaccaatcaaagtagatgat
gccaagaaaaaggaacaagaagcagctgcagctgctgcagcatctaccaagacaagaaag
gatggatcaactccccaacaaccagctcctgctgaaccacccaagccaagatggacaggt
aaattgccagtacaatatttaaacgagtattgtcaaaagaatcaaatgaatagacctgtc
tttgaagagatgagattccactttaagggacaacaacaattcaagttcaaggttactctt
gcatttgaaggcaagaagaagcagatgacctacaagtcataccaacctccacacggatca
cccgccgtgatggatgcaaaggcatatgctgccttggtggcactacacgacctctgtggc
aacaccaccatctacaaactgttcccacccgagtttacaccattctggatgtcgttggcc
gaagtggccaaggtggaacaggaacaaatccaaaaggagatggagcaacaactagccatc
gaggcaagacgcaaggagagggaaccaaaacacacccaacaaatcccaagtattgtcatg
tcggatgaagcaatccgaactattcattcattgaccaaacaaatgaatcttagattagaa
ggtgaaaatgaattggataataatagctctaactcttcgacaatgagtggagaagaatta
aacaaacgtgaaaaagaaattgttggtaaatcattggaagagttgggattcgaacaacaa
gacattgaaaatgcattccaacgtgtaaaggatattacaaatttgaccaatttaatatct
tggttatgtttaaatgttaaagatgatactttaccagttgcttttcgtccaaagaatttg
ggtattcaaaagaaatcaaagacctctacaacgactcaaattgattcaacctcttcaact
acaaatgttcatattattgatgcaagagatagattgattgatttgggatggttaccaaat
gaaattgacaaggtgattgattcatctttggaatctttggtaaaggacaaccaagatgct
tttgcaagatgttggtatcggttacttggactacaagatgagagttttgatacagacgtg
gtagcggatgatgaaacatgtcaagaacaacgtgaaatggagattgaagctcttagatca
atctatggtgactctatcaaggtcatctcaccacaaacctatcaaatcacattggatgtt
ggtgtattagaggtttatctaccgggatggtgcaagtatccattccaaccaccagtcctt
attctcaaaccattgaccaagtcaaagtggaacaagaaggggtcatatgtgatttgcaaa
gagatggttaaacaatgccaagagtttattggctcacctgtactattcaatattatcaat
tggtgtagtacaactgatttacctcaaatcattgccaattcaaaggatgaagagagtgca
gctgccgaggaatcaaatcacaataataataatattgacaagaatgttttattgggtact
tcatcaacatcatcatcaacaggaaagaaacaatctcaacaacctagacaaacacttggt
agtataaagagtgatgatcgtatcaatcaagatttattacaatcatataaaactagtctg
tcaaatactagttatacaccagttaaaaagattagagaatcgttgccagtctactccaag
aaacaacaatttatcgatctattggaacgtaatcaaattgttgtggtaacaggtgagaca
ggttcaggtaaatcaacacaaattcctcaatacattatggaaagttttgtaaagaatgga
aagggatccaactgcaatatcatttgtactcaaccacgtagaatttcagcgattggtgta
gctgatcgtgtttcatttgaatggagtggtggtcaaaaggatcagactggtcaacatgtt
ggttaccaaatcagaaatgagagtaaacgaagcagaaatactcgacttttgttctgtacc
actggtattctacttagaatgatggttggtggagaaagaggagatatgctctcgggtgtt
tcccatatcatagtggatgaagttcacgaaagaagtgtcgacaatgatttcctactcatc
attttaagagccttggtcaagaaacgtcgtgacctcaaggttattttaatgagtgctacc
ttggatgcagagttgattgccaactacttttccattaaaaaggattctatctttgctgtc
gctggtttcactcatccagttagtcacgtctatctcgaggattctattcggatgattgat
tacaaaccgtcagtctttttgaaaaagcaaaaggatagtgaagagtctggtgaatcagag
gatggaacatcaactacatcaaccacatcaacaagtgactctgtcaaggatattttgtat
catatggatgccaatttgaaacaaaagcgaatcaatgccgagtttattgaaaagttgctc
atctatttggcgagacaagagttgggcaagagaaagtcgattcttgtatttgtccctggt
atgggtgacattttaaatatctgtgatcgactaaacaactgttccatgtcatcgtccatg
tgggtgttgcctttgcactcgtcactcactcccaaagaccaacaaagagtttttgaaagg
gcaccagctgatcgtgtaaagattgtagttgccaccaacattgctgaaacttctattacc
attgatgacgtttctatcgtcgtcgataccggtcgtgccaatcaggtcaactacaaccca
atcactaaaaactcaatgatgggcgaatcgtttgtctccaaggcagccatcagacaacgt
gctggtagagctggtcgtacctctgcaggtacttgctatcatctctacacccgtgccatg
gagagtcagtttgacgaccaagaaacaccagagattcttagaacaccactccagcaactt
tgtctccatgttaaactcttccaaaccgatatgaacaataccgctgctggtggaaaggtc
aacaagattgagagtttcctatccaatgctatccaaccaccatccaccgaatcaatcaag
gctgctattgaagagttagagtctgtaaatgccatcgaagtacaagatggaggagagaga
cttactccacttggataccatttggcacagttgccagtcgatatctacattggaaaaatg
ttgttatttggttgtattttccgttgtatcgatcctattctcactattgctgcaacactc
agttacaaaacaccatttatcagtggtgccgacaaacgtgataagccacaggttaaatac
ggacacggacttcaaagtgatcatttcacatttgccattgcctatgatcattggagaaag
gcaattaaagatggtaacgagtttagtttctgtaaagagaatggtcttgctctctctaca
ttaaaaacaattcaagatttaaagattcaatttgctgaaatcctttccgaaattgggttc
ttaccttcaaatattactcaaagatcaattcaaaaagaacaaaaattaaatagaggatct
gatggtatagttgaaagtgttggagcattatttaattcaaatggtggagatcaaaagata
ttaaaatctgtattgtgtgctggaatgtatccaaagattggtagaatcgatgttccgcca
actacctatgtcagcactgctggtggtgccattgccaacaagcacgatccaatgaatctc
aagatccttacaaagagaaaggcaactccgcaagaactaaaggaaatgcatgaacaatat
atcaacagccacgctggtggcaaggacgctaaaaactctgacaaatttaagcatggttac
aaaaaggaaagaatctttttgcaccctcgttccattaatttcgacgagggagagtatacc
tctccatttattgtctaccatgacaaggttcaaacctctcgtttgtttgctcaccatacc
acttgcgtgtcgtcgttgaccctgttgatgttttcaattggtggcaaggttgaaattgac
tctacattccaacacatcatcttggatcagtggatcaagtttaaatcaagtggcaaggta
ttggcaatgattcgagaaattagattaatgttggataaattattagagttaaagattaaa
gatccttcttttgatacttcaacatctgttgtaattgatatcattacaaagattgttaaa
aaagaaggttatctatag
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integrated database retrieval system
