Desulfurococcus amylolyticus DSM 16532: Desfe_1469
Help
Entry
Desfe_1469 CDS
T02136
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
dfd
Desulfurococcus amylolyticus DSM 16532
Pathway
dfd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desfe_1469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfd03021
]
Desfe_1469
Enzymes [BR:
dfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desfe_1469
Transcription machinery [BR:
dfd03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Desfe_1469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AFL67334
UniProt:
I3XTR0
LinkDB
All DBs
Position
complement(1377629..1380289)
Genome browser
AA seq
886 aa
AA seq
DB search
MSSKIVTNRISRIKFGILSPDEIRKMSVTQIFSSEVYDNDGSPIDGGVMDRRLGAIEPGE
TCPICGNTRDSCPGHFGHIELAKPVIHVGFAKQILIYLKATCRNCGRLKIPEEEKGEYLR
LLSDLQELGAPYLIKRFHEYIRRKASTADTCPHCGAKQYKIKLEKPHTFYEQTERGLLKL
TPSEVRGRLEKISNDDVKLLGGDPSDARPEWMVLTVLPVPPRSVRPSVLLETGIRSEDDL
THKLVDIIRTNNRLREHVEGGAPSAIIEDEWELLQYHITTYFDNEVPGVPVAKHRSGKTL
KGIAQRLKGKEGRFRNNLRGKRVDFSARTVISPDPSLSINEVGVPEDVAKILTIPERVTP
WNIEEMRKLVLNGPEKWPGANYIVRPDGRKISLKFVDRKAAAESLEPGFIVERHLMDGDI
VLFNRQPSLHRISVMAHVVRVLPYKTFRLNLLVCPPYNADFDGDEMNLHVPQSEEARAEA
RLLMLVERHILTPRYGGPIIGGLQDYISGAYILTSKTTLLDKDDVVDLLSSTGYKGELPE
PAILKPRALWTGKQLVSLFLPKDFNYKRNSKIGSAAALRCIDEDCPHDSLVIIKNGVLLE
GVLDKASIGREEPESLVHWLIKEYGEDYGRMFMDRVYKMFIRMSEKYGLTMSYTHLTLPE
EARNRLSEIIAGKKKEVEELISKYRRGELLARPGKTVKETLEDEIIDILSKKLLDSVAEV
ITPYFTLVNPVVIMARTGARGNPVNLTQMAALLGQQTVRGKRLTRGYLGRALPHFKPEDL
GPEARGFIASGFVHGLNPVEMFFHAAAGREGLIDTAVRTSQSGYMQRRLINALQDLRVEY
DGSVRLTTGEIVQLLYGEDGVDPMKSDHGKSVNIDRVIEKIFGGGL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcaaagatagttaccaataggatatcacgtataaaattcgggatactctcgcca
gacgagataaggaagatgagtgttacccagattttctcctccgaggtatatgataacgat
ggctcccctatagatggcggcgtaatggataggagactaggagctatcgagcccggtgaa
acatgcccaatctgcggtaatacaagggattcatgtccaggtcacttcggacatatagag
ctggctaaacccgttatacatgttggattcgcaaagcagatacttatatatttgaaggcg
acatgtagaaactgcgggagactcaagataccggaggaggagaagggcgagtacctgagg
ttgttaagcgatctccaggaactcggagcaccctacttaattaagaggttccacgagtac
attaggcggaaggcgagcacagcggatacatgcccacattgcggtgccaagcagtacaag
ataaagctggagaagccccacacattctatgagcaaaccgagagagggctcttaaagcta
acaccaagcgaggtacgtggaagactcgagaagatatcgaatgacgatgtgaaactactt
ggcggagacccgagtgatgctagacccgaatggatggttctaacagtactaccagtaccc
cctaggagcgtgaggccatcagtactcttagagacaggcataagaagcgaggacgactta
acacataagcttgttgacataataaggacgaataacaggctcagggagcatgttgagggg
ggagcaccaagcgcgatcatagaggatgaatgggaactacttcaataccatataaccacg
tacttcgacaacgaggtcccaggagtaccggttgctaagcatagaagtggaaagacattg
aagggtatagcgcagaggctgaagggcaaggagggaaggttcaggaataacttaagaggt
aagagagtagatttctcggctagaaccgttataagtcccgatccaagcctaagcataaac
gaggtcggcgttcccgaggacgttgccaagatactcacaataccggagagggtgacaccg
tggaacatcgaggaaatgcgtaagctggtgttgaatggaccagagaaatggcctggagca
aactacatagtgagaccggatgggaggaaaataagcctgaaattcgtggataggaaggca
gctgctgaatcattagagccgggcttcatagtagagaggcatttaatggatggagatata
gtattgttcaataggcagccatcattacataggatatcggttatggctcatgttgtaagg
gtcttaccatataagacgttcaggctgaacctgctcgtgtgcccaccatacaatgccgat
ttcgatggagacgagatgaacctacatgtacctcagagcgaggaggccagggctgaggca
aggctactaatgttggttgagagacatattctcacaccacgttacggaggccccataata
ggtggtctacaagactatataagtggagcatatatcctcaccagcaagaccacactcctg
gataaagacgatgtagtagacctactctcttcgacaggttataagggcgagttacctgag
ccagcgatcttaaagccccgtgctctctggacaggtaaacagcttgtctcattattcctc
ccaaaggacttcaactacaagaggaactcgaagatcgggagcgctgcagcattaaggtgt
attgatgaggattgcccccacgacagcctcgtaataatcaagaacggcgtactacttgag
ggcgtactggataaggcgagtattgggagggaggagcccgagagcctagttcactggctt
ataaaggagtatggtgaagactacgggagaatgtttatggatagagtctataagatgttt
ataaggatgtcggagaaatacggcttaacgatgagctatactcatttaacgcttccagag
gaggctaggaaccggttaagcgagataatagctgggaagaagaaggaggttgaagaacta
atatccaagtataggagaggagagctactggcaaggccaggtaagacagtcaaggagaca
ctggaagatgaaataattgatatattatccaagaagctacttgacagtgttgccgaggta
ataacaccatactttacactagtcaaccccgttgtaatcatggctagaaccggtgcgaga
ggaaacccagtcaatctgacccagatggccgccctacttggacagcaaacagtaagagga
aaacgccttacaaggggctaccttgggagagcactaccccacttcaaaccagaagacctg
ggtccggaggcaagggggttcatagcaagcgggtttgtacatggattaaatcctgttgaa
atgttcttccatgccgcggctggtagagaggggctgatagatacggctgtcaggacaagc
cagtctggatacatgcagaggcgtttaataaacgcgttacaagacctaagagtggagtat
gatggaagtgtacgccttaccacaggtgagatagtccagttactctatggtgaagacggt
gttgacccgatgaagagcgaccatggtaaatccgttaacatagatagagtcattgagaaa
atatttggaggtggactataa
DBGET
integrated database retrieval system
