KEGG   Dyadobacter fermentans: Dfer_3332
Entry
Dfer_3332         CDS       T00970                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dfe  Dyadobacter fermentans
Brite
KEGG Orthology (KO) [BR:dfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfe03400]
    Dfer_3332
Enzymes [BR:dfe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Dfer_3332
    5.6.2.6  RNA 3'-5' helicase
     Dfer_3332
DNA repair and recombination proteins [BR:dfe03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Dfer_3332
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ACT94543
UniProt: C6VS22
LinkDB
Position
complement(4077156..4079627)
AA seq 823 aa
MNILTKSRGHSIVEQWFKDKKWKWAAFQKEAAAAYLAGKSGLVNAPTGSGKTYSLWLPIL
IRHINSLPKKPLKTKKGLQVLWITPLRALSKDLFRNMEMAALEMNLTWRVGIRTGDTGTR
ERNEQKKQMPDALIITPESLHMLFTQKNASEFFKNLHTVVVDEWHELMGSKRGTQTELAL
ARLRTINPDLQTWGISATIGNLEEARQVLLGMQFPQENAVTIRANTEKKILVESIIPERV
ETLPWSGYMGIRLVDKVVEIVNQSRTTLLFTNTRSGTEIWYRTIIEKYPEFAGIMALHHA
SLDREIRDWVEEALHDERLKLVICTASLDLGVDFRPVDTVIQVGSPKSIARFVQRAGRSG
HRPGVDSKIFFCPTNALELIEAVSLREGVLKNMIEDRPPVAHAFDVLAQWMITLAVGEGF
DEAELFEEVRSAYGYQYLNREEWEWLLGYITTGSSSLTVYDEYKKVERVNGRYVVTSRRI
AHRHLLSMGTIVSEVSLKVKLQSGKYLGAVEESFVTWMKTGDVFFFAGMSVEFVRIHEMT
VTVKKADGKKGFLVRWAGGRMPLSSQLSAFIRERLADAIENPHKELELAKMQPLLELQAK
RSVIPKTNQLLIEQCETREGYHIFIFPFEGRLVHEGMSILLAYRISQLRPITFSVAMNDY
GFELLSDQFVDIGEILGETDLFSTKHLVDDIYQSVNATEMAKRKFREIAAIAGLMFQGYP
GKYVKTRQLQASSSLLFTVMSKYEDNNLLIKQAYQEVLTYQLEEVRMRDALARIEHQKIV
IQHTDRPTPFSFPIMVDRLREQLTSEKLDDRIQRMIKQYSNAD
NT seq 2472 nt   +upstreamnt  +downstreamnt
ttgaacattttgaccaaatcccgcggacatagcattgttgagcaatggtttaaagataaa
aagtggaagtgggccgcttttcagaaggaggccgcggcggcttacctagcggggaaaagc
ggattggtgaacgctcctacgggcagcggcaagacctactcgctctggctgccgatcctg
atccggcatatcaattcattacccaagaagccgttgaagaccaaaaagggcctgcaagtc
ctttggataacgccgctacgcgcgctttcaaaggatttgttccgcaatatggagatggct
gcgctggaaatgaaccttacgtggcgtgtgggcatccgtacgggcgatacgggcacacgc
gagcgcaacgagcaaaaaaagcaaatgcccgatgccctcattatcacgcccgagagcctg
catatgctcttcacccagaagaatgcctccgaatttttcaaaaacctgcatacggtggtg
gtggacgaatggcatgagctcatgggcagcaagcgcggcacgcaaaccgagctcgcactg
gcccgcctccgcacgatcaaccccgaccttcagacgtggggcatttccgcaaccatcggc
aaccttgaagaagcgcggcaggtgctgctgggcatgcagtttccgcaggaaaacgcagtg
acgatccgggccaataccgagaaaaagatattggtagaaagcattatacccgaacgggtg
gaaacattaccgtggtcggggtatatgggcatcaggctggtggataaggtggtggagatc
gtgaaccagagccgcacgacgctgctttttaccaatacgcgatcgggcacggagatctgg
taccggacaatcatcgaaaaatacccggagttcgccgggataatggcactgcaccacgcc
tcgctcgaccgggagatccgcgattgggtggaggaggcattgcacgacgaacgattaaag
ctcgtcatttgcaccgccagcctcgatttgggagtcgattttcgccccgtggacacggtg
atccaggtgggaagccccaaaagcatcgcgcggtttgtgcagcgtgccgggcggagcgga
caccggccgggcgtggatagcaagatctttttttgtccgaccaatgccctggaactgatc
gaagcggtgtcgctgcgggaaggcgtgctcaaaaacatgatcgaggaccgtccgccggtt
gctcacgcattcgacgtgctggctcaatggatgatcacgcttgccgtcggagaagggttt
gatgaggcggagctttttgaagaagtacgcagtgcttatgggtatcaataccttaaccgg
gaggaatgggaatggcttttgggctacatcacgaccggcagttcttcactcactgtttat
gacgaatacaagaaggtagagcgcgtgaatggccgctacgtggtgacgagccgccgcatt
gcacaccggcatttgctcagtatggggacgattgtttcggaggtttcgctcaaagtgaag
ctccaaagcggcaaatatctgggtgcggtggaggaatcgtttgtaacctggatgaaaacg
ggcgatgtgttcttcttcgcgggcatgagcgtagaatttgtacgaatccatgaaatgacc
gtgaccgtcaaaaaagccgatggcaaaaagggcttcctcgtgcgctgggccggcgggcgt
atgccgctttcctcgcaactgtcggcattcatccgcgagcgcctggccgacgccattgaa
aatccgcataaagaactggaactggccaaaatgcagccgttgctcgaattgcaggccaag
cgctcggttatccccaaaaccaaccaactcctgatcgaacaatgcgaaacccgcgaggga
tatcatatatttatatttccgttcgaaggccggctcgtgcacgagggaatgtcgattctg
ctcgcctaccgcatcagtcagctgcgaccgatcacgttctcggtggcgatgaacgactac
ggatttgaactgttgagtgatcagtttgttgatataggtgaaatcctcggcgaaaccgat
cttttttcgaccaaacacctcgtggacgacatttaccagagcgtaaatgcgacggaaatg
gccaagcgaaaattccgcgagatcgccgcgatagcggggctgatgttccaggggtatccg
gggaaatacgtcaaaaccaggcaattgcaggcatccagctcgctgttatttactgtgatg
agcaaatatgaggacaacaacttgctcatcaagcaggcataccaggaggttttgacctac
cagctcgaagaagtgcgcatgcgcgacgcgctcgcccggatcgagcatcagaaaatagtg
atacaacacaccgacaggcccacgccattttcatttccgatcatggtggaccggcttcgg
gagcaattaacttcggaaaaactggatgacaggatccagagaatgatcaaacagtacagt
aatgcagattga

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