Dickeya fangzhongdai DSM 101947: CVE23_05775
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Entry
CVE23_05775 CDS
T05277
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfn03400
]
CVE23_05775
DNA repair and recombination proteins [BR:
dfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CVE23_05775
Archaeal homologous recombinant proteins
CVE23_05775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
ABC_tran
cobW
AAA_21
NTPase_1
nSTAND3
zf-Mss51
GTP_EFTU
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATZ93527
UniProt:
A0A2K8QJ46
LinkDB
All DBs
Position
complement(1244470..1248153)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTREPFASNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVGPSQNELMTRHTAECLAEVEFEVKNVAYRAFWSQRRAHNSPEGNLQPPKVELALCAD
GKILTDKVNDKLTMIADITGLDFDRFTKSMMLSQGQFAAFLNADANQRAELLEELTGTDI
YGQISERVFEKHKDAQSKLETLRAQVTTLELLSDEQRQALEQQLEAIRQQEQSLSLHREE
VLGHQRWYDTLLQLQQAQQQAQQQRAAQEQLQQQSQSQMDKLQRSEPAEKLRPRFDERER
ALREKQRLTQQLNSVRQQISRQQDALNLLKIQLEKAQATRQQHAEYRQQQETLINERILP
LDHHIATQQAQRAQQQQALDNLLEQQKTLIASLTRLQRQQEQTRQRLEDIENYRRQHSRH
QHLGSHIPLWQAQFPQQQKWQQDLQVLQEKAAQQQIQAEYLDQQRASLAEKHQAQQSACE
RASQLLTEHLQQDEQLEAEQPLADLRQQLARLMAERPDRQQLATSAAVLQQLISQRTLLE
AQQLDTQRRIQALEDQQTQQRQDYQRQADHLADLDKRHELELRIVSLERERQQLQPGKEC
PLCGSPHHPAVERYQALRPSETQLRLHALRQEVEALKASVVQTETQLQLQKQHRLQQQNA
LDGVRRDYESLQLQCKSVSERLLVDFDPLQLPALHQWIEASNVQEQSLQAQIASRERNQR
HIQESKDLLTSAQQLLAQTVQQLELNTQQQSSLHASREELRLLLEKTERELQRLHDSLSQ
TLETFELTAPTLAQQEDWLRQRQTEWLRWQENEHEQHQCQPQLAALEAEIVASQQRQEET
DAAIKTYQQQLADTQRTLEQAQQQRWQLMGNQAVNEVLKQLRQVSQTLELESQQAQQQWQ
QGQSLHSRLNGEIGSLEQQNQHAETALQQLQTGFAEELTAAGFDDEAAFRHALLAEAERH
HLLTLKERLNQRQQQVDALQQQADSALEQHMTTRPESMPEGISDHDIRQLLSGLGDMVKA
EAAHQGELRQQLASDQQRRDKQRQLLEAIARGQQQCDDWGYLNQLIGSQKGDKFRRFAQG
LTLDHLVFLANRQLSRLHGRYLLQRKASDTLELQVADTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSTKTRIDSLFLDEGFGTLDGETLDTALDVLDNLNASGKSIGVISHVEAMK
DRIQVQIRVRKRNGLGVSQLDSAYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcctgcgattgaaaaacctcaactcgctgcagggcgagtggaaaatc
gatttcacccgcgagccgttcgccagcaacagtctgttcgccatcaccggccctaccggc
gcgggtaaaaccacgctgctggacgccatctgcctcgcgctgtaccaccagacgccgcgt
ctgaaggtcggccccagccagaacgagctgatgacgcgccacaccgccgaatgtctggcg
gaagtggaattcgaggtgaagaatgtcgcctaccgcgccttctggagccagcggcgcgcc
cataatagcccggaaggcaatctgcagccgcccaaggtggaactggcgttgtgcgccgac
ggcaaaatcctcaccgacaaggtgaacgacaagctgacgatgatcgccgatatcaccggg
ctggatttcgatcgtttcaccaaatcgatgatgctgtcccaggggcagttcgccgccttc
ctgaacgccgatgccaatcagcgggccgaactgcttgaagagctgaccggcaccgacatt
tacggccagatctcggagcgggtattcgagaaacacaaagacgcccagagcaagctggaa
accctgcgggcgcaggtcactacgctggaactgctgagcgacgaacagcgtcaggcgctg
gagcagcagctggaagccatccgccagcaggaacaatcgctgtcattgcaccgggaagag
gtgttggggcatcaacgctggtacgacacgctgctgcagctccagcaggcgcaacaacag
gcccaacagcagcgtgccgcacaggaacaattgcaacaacagtcgcaatcgcagatggat
aagctgcagcgcagcgaaccggcggaaaaactgcgtccgcgctttgatgaacgcgaacgc
gcgctacgggaaaaacagcgcctgacccagcagttgaatagcgtccgccagcagatcagc
cgccagcaggatgcgctcaatctgttgaaaatccagctggaaaaagcgcaggccacccga
cagcagcacgccgagtatcgccagcagcaggaaaccttgatcaatgaacgtatcctgccg
ctcgaccatcacatcgccacccagcaggcccagcgcgcccagcaacagcaggcgctggat
aacctgctggagcagcagaaaacgctgatcgccagcctgaccagactacaacgccagcag
gaacaaacacggcaacggctggaagacatcgaaaactatcgccggcagcatagccgccat
cagcatttgggcagccatattccgctgtggcaggcgcaatttccccagcagcagaaatgg
cagcaggacttgcaggtgctgcaggaaaaagcggcgcagcagcagattcaggcggaatac
cttgaccagcagcgcgcctcgctcgccgaaaaacatcaggcgcagcaaagcgcctgcgag
cgagcgagccaactgctgaccgagcacttgcagcaggatgaacagctggaagcggagcaa
ccgctggcggacctacgccagcaactggcccggctcatggccgaacggccggatcgtcag
caactggccaccagcgccgccgtgctacagcagttgattagccagcgcaccctgctggaa
gcgcaacagctggacacccaacgccgcattcaggcgctggaagatcaacagacccagcag
cgtcaggactatcagcgtcaggccgaccatctggccgacctcgacaaacgtcacgaactg
gagctgcgcatcgtcagtctggaacgcgagcgccagcaactgcaaccgggcaaagagtgc
ccgctgtgcggctccccgcatcatccggcggtggaacgctatcaggcgctgcgcccttcg
gaaacccagctccggctgcatgcgctgcgtcaggaagtggaggcgctgaaagccagcgtg
gtgcaaaccgaaacccagcttcagttgcaaaaacagcaccgcctgcagcagcaaaacgcg
ctcgacggcgtccgacgcgattacgagtcgctgcagttgcagtgcaaatcagtcagtgaa
cgcttacttgttgatttcgatccgctgcaactgccggccctgcatcagtggattgaagca
tccaacgtgcaggagcagtcgctgcaagcgcagatcgccagtcgtgagcgtaatcagcgc
catattcaggaaagtaaggatttactcacctcggcgcagcaactgctggcgcaaaccgta
cagcaactggagctgaacacccagcaacagtcgtcgctgcacgcctcgcgggaagaactg
cggttgttgctggaaaaaaccgaacgcgagttgcaacgcctgcacgacagcctcagccag
acgctggaaacgttcgaactgacggcgcctacgctggcgcagcaggaagactggctgcgt
cagcgccagacggaatggctgcgctggcaggaaaacgaacacgaacagcatcagtgccag
ccgcaactcgccgcgctggaagcggaaatcgtcgccagccagcagcggcaggaagaaacc
gacgccgccatcaaaacctatcagcagcaactggccgatacccaacgcacgctggaacag
gcgcagcaacagcgctggcaattgatgggcaatcaggcggtgaatgaggtgctgaagcaa
ttgcggcaggtcagccagacgctggagctggaaagccagcaggcgcagcagcagtggcaa
cagggccagtcgttgcacagccgcctgaacggggaaatcggcagtctggagcagcaaaac
cagcatgccgaaaccgcattgcagcagcttcagaccggatttgcggaagagctgaccgcc
gccgggttcgacgatgaagccgccttccgccatgccttgctggccgaggccgagcgccat
catctcctcacgctaaaagagcggctcaaccagcgtcagcagcaggtggatgcgttgcag
cagcaggcggacagcgcgctggagcaacacatgacgacccggccggaatcgatgccggaa
ggcattagcgaccatgacatccgtcagttgctttccggccttggggacatggtgaaagcc
gaagccgcacatcagggtgaactgcgccagcagcttgccagcgatcagcaacgccgcgac
aaacagcgccagttgctggaagccatcgcccgcggtcagcaacagtgcgacgactggggc
tacctcaatcagttgattggctcgcagaaaggcgacaaattccgccgcttcgcgcagggg
ctgacgctagatcatctggtgtttctggccaaccgccagctgtcgcgtctgcatgggcgc
tatctgctgcagcgcaaggcatccgacacgctggaattgcaggtggccgatacctggcag
gccgacgcggtacgcgatacccgcacgctgtccggcggcgaaagttttctggtcagcctg
gcgctggcgctggcgctatccgatctggtcagcaccaaaacccgtatcgactcgctgttc
ctcgacgaaggttttggcacgctggacggcgagacgctggataccgcgctggacgtactg
gataacctgaatgcttccggcaagagcatcggcgtcatcagccatgtggaagcgatgaaa
gatcgtatccaggtgcaaatccgggtcagaaagcgcaacggtctgggcgtcagccagctc
gacagcgcgtatgcggtgaaataa
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integrated database retrieval system
