Dehalogenimonas formicexedens: Dform_00676 Help Entry Dform_00676       CDS       T04654                                  Symbol ligD Name (GenBank) ATP-dependent DNA ligase LigD   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism dfo  Dehalogenimonas formicexedens Pathway dfo03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:dfo00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     Dform_00676 (ligD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dfo03400]     Dform_00676 (ligD) Enzymes [BR:dfo01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      Dform_00676 (ligD) DNA repair and recombination proteins [BR:dfo03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      Dform_00676 (ligD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  APV44031 UniProt:  A0A1P8F6C5 LinkDB All DBs Position complement(632493..633455) Genome browser AA seq 320 aa AA seqDB search MPERLAPMLATLTEKPFTDPDWYFEPKLDGYRIVVFVRNGESRLQSRHFQDYTGHFPSIA KEMSQQPVKEAIFDGELVALDENGKPCFQCLQQHLIQQRENIVSGYLVLYYAFDLLYLDG FDLTALAQSERAGLLKTALRPGKSVKAISRFEGDGAEIFKAAIEAGFEGIIAKRRDAPYQ EGKRSNDWLKIKGTLADEFIIAGYTSGQGARSGAFGSLVLAQYDDNKRLAHAGNVGTGFD ERLLEDLKAKMDKLTTGKSPFDARIPFENKTTWLKPELVAEVKYAERTRDGILRHPVFLR LRDDKPATDVKAQKILRSEK NT seq 963 nt NT seq  +upstreamnt  +downstreamnt atgcccgaacggctggcgccgatgctggcgactctgacggagaaaccgtttaccgatccg gattggtatttcgagcctaaactcgacgggtacaggatcgtggtgtttgtccgtaatggc gaatccaggctccaatcccggcattttcaggattacaccggtcatttcccctccattgcg aaagaaatgtcccaacagccggtcaaggaagccattttcgacggggagctggtggcgctt gatgaaaacggcaagccgtgcttccagtgtcttcaacaacacctgatccagcagagggaa aatatcgtttcgggctatttggttctttattacgccttcgatcttctgtatctcgacgga ttcgacttgacggcattagctcaatccgaacgggctggcctgttaaaaacggcgctcagg ccgggtaagtccgttaaagctatatcaaggtttgaaggcgatggagccgaaattttcaaa gcggctatcgaggccggattcgagggaattatcgccaagaggcgtgacgcgccctatcag gagggcaaacggtcaaacgactggctgaagatcaaagggaccctggcagatgaatttatt atcgccggatatacctcgggtcaaggagcgcgttcaggcgccttcggttcacttgtcctt gctcaatacgacgataacaaacggctggcccatgcgggaaacgtgggaaccggattcgat gaacggctcctcgaggatctgaaggcgaagatggataagctgacaaccggtaaatctcct ttcgacgccaggattccctttgaaaacaaaaccacctggctcaaaccggaactggtcgcc gaggtaaaatacgccgaacgcacccgtgacggcatattgcggcacccggtttttttaagg ttgagggatgataagccggcaacggatgtaaaagctcagaaaatcctgaggtcggaaaaa tga

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