Dehalogenimonas formicexedens: Dform_00741
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Entry
Dform_00741 CDS
T04654
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dform_00741 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfo03400
]
Dform_00741 (nth)
Enzymes [BR:
dfo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Dform_00741 (nth)
DNA repair and recombination proteins [BR:
dfo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dform_00741 (nth)
Prokaryotic type
Dform_00741 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
5_3_exonuc
IMS_HHH
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
APV44095
UniProt:
A0A1P8F6N5
LinkDB
All DBs
Position
694325..694963
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AA seq
212 aa
AA seq
DB search
MTDKPADIHETIKRLKSAYPASRIALNFKSPLELLAAVILSAQTTDVAINSLTPALFDRY
KSAQDYAAADAQELEGLIKRSGFYHAKAKSLMGMGKILVERFNGQVPSTMADLTEIPGVG
RKTANIVLWNAFGKIEGIAVDTHVARLSKRLGFTQEDDPVKIEKDLMKLVPHGDWGRFSH
WLQDHGRAVCTARKPNCAGCLLNDICPSAFKV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaacccgctgacattcatgaaacgataaaacgcctgaagtccgcttacccc
gcgtcccgaattgctctgaatttcaagagtcccctggaactgttggccgccgtaatcttg
tcggcccaaaccaccgatgtggcgatcaactctctcaccccggcccttttcgacagatat
aagagcgctcaggattacgccgctgccgacgcgcaggaacttgaaggtttgataaagcga
tcgggtttttaccacgcaaaagccaagagtctcatgggcatggggaaaatcctggttgaa
agattcaacgggcaagttccttcaaccatggctgacttgacggaaatacccggtgtcgga
cggaaaactgccaatatagtgttgtggaatgcattcgggaagatcgagggaatcgctgtc
gacactcatgtcgccaggttgtccaagcgcttgggttttactcaagaagacgatcctgtg
aagatcgagaaggacttgatgaagctagtgccccatggtgattggggcaggttctcacac
tggcttcaagaccatggccgggcggtctgtaccgcgcggaaaccaaattgcgcgggatgc
cttttgaacgatatttgtccgtccgctttcaaagtttag
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