Dehalogenimonas formicexedens: Dform_02085
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Entry
Dform_02085 CDS
T04654
Symbol
priA
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dform_02085 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfo03400
]
Dform_02085 (priA)
Enzymes [BR:
dfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dform_02085 (priA)
DNA repair and recombination proteins [BR:
dfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dform_02085 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_3primeBD
Helicase_C
PriA_C
PriA_CRR
AAA_30
AAA_16
Trm112p
zf-CHY
zinc-ribbons_6
PIF1
DAP3
ADDB_N
SWI2_SNF2
AAA_19
FAM76
cobW
zinc_ribbon_12
Motif
Other DBs
NCBI-ProteinID:
APV45394
UniProt:
A0A1P8FAB6
LinkDB
All DBs
Position
1970187..1972607
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AA seq
806 aa
AA seq
DB search
MPYAEVSVNSPAAGRGAYSYELPENLAVRPGQAVLVPFGPRILQGIAVEVSDTPRFDATR
QLSGVIDPPLYLTAAQLAAGRWIRRHYLAPLFPSLALWLPPGFERSAESVFTRSGLDIGQ
IPLSELERDFLATLDTTIPADQKTLEKRFGKLAAQKAVRHLLGHGLIERRYRLQALKVKP
LLERVVHLKGDPENALKNAANLLKRSPKQSAVLRLLATSRGRLPLAEIRREFGDVAAVVS
ALVAKDLVHIANEESRRNPSLPAAVELPMPHTLTPAQAAAVSEVTASVDRAGGETFLLHG
VTGSGKTEVYLHAAKHTLKQGKQVVVLVPEISLTHQIIERFTARFSGRVAVLHSKLSLGE
RFDQWRGIAEGDYDIVIGPRSALFAPFANPGLIVIDEEHEWAYKQQDTPPLYHAREAARR
LSLETGATLLLGSATPDIESYFKALRGDYHLLELPDRLTPHPSAPLPPVTLIDMRDELKS
GNLSIFSRKLKAEIEAALKNGEQVILFFNRRGGATFIQCRDCGEVLKCRNCRLPLGFHPV
ENRLVCHHCNAQYRVPAVCPVCGRSRIKFIGLGTQKLEEETKKEFPGVKILRWDSDAARD
KDTGYRIFDDFRAGKADILIGTQVVARGLDLPRVGLVGVINADTALNLPDFRAGERTFQL
LLQVAGRAGRGEFPGRVVVQSYQPAHYAITAAVAHDYKGFYQKELEYRRLLGYPPFIELA
VLTVQHPAEADGLQIAHNLKKKLELERDSTGAKDIEFIGPAPAFVPRRRGKYRWQVIVKG
RDIVDFLDKACLSSGVGVDVDPLGLD
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
ttgccttacgccgaggtcagcgtcaattccccagccgccgggcgcggcgcgtacagctac
gaactgccggaaaacctcgccgtccgtcccggccaggcggtcctggttcctttcggcccc
aggatacttcagggcatcgccgtcgaggtctcggacacccccagattcgatgccacccgc
cagctctccggggtcatcgatccgccgttatacctgaccgccgctcaactggccgccggc
cgctggataagacgccattacctggcgccgttattcccttctttggcgctgtggctgccg
cccggttttgagcggtccgccgagtcggtgtttacccgttcggggctggacatcggccaa
atccccctttcggaactcgaacgggacttcctggctacccttgacaccactattcccgct
gatcagaaaacgctcgaaaagcggttcggcaaactcgcggcccaaaaagccgttcggcat
ctgctgggtcacgggctgatcgaacgccgctaccggctgcaggcgctcaaggtgaagccc
ctgcttgaaagggtagtgcacctgaaaggcgatcccgagaacgccctgaaaaacgcggct
aatctgcttaagcgatcccccaaacaatcggcggtcctccggctgttagccacctcgcgc
ggccgcctcccgttagccgagatccggcgggaatttggcgatgtcgccgccgttgtttcg
gctcttgtggccaaagacctcgttcacatcgccaacgaggaatcccgccgcaatccgagt
cttccggcagccgtcgagctccccatgcctcatactttgacccccgcccaagccgcggcc
gtttccgaagtgaccgcttctgtcgaccgggccgggggcgagaccttcctgcttcacggc
gtgaccggctccggcaagacggaggtctacctccatgccgccaaacacaccctgaaacag
ggcaagcaggtcgtggtgctggtgccggagatttccctgacccatcagatcatcgagcgc
ttcaccgcccggttctcgggccgggtggcggttctccacagcaaactctcgctgggggaa
aggtttgaccagtggcggggcatcgccgagggcgattacgacatcgtcataggtcccaga
agcgccctgttcgccccgttcgccaatccgggtctgatagtcatcgacgaagaacacgaa
tgggcttacaagcagcaggatacgccgcctttatatcacgcccgggaggccgcccgccgc
ctgtccctggaaaccggggctacgctgctcctggggtccgctaccccggacatcgagagt
tatttcaaggccctgcgcggcgattaccacctcctggaactgccggaccggctcactccc
cacccctccgccccgcttcccccggtgaccctgatcgacatgcgcgacgaattgaaaagc
ggcaatctctccattttcagccgcaaactgaaagccgagatagaagccgcgctcaaaaac
ggcgaacaggtcatcctctttttcaaccggcgcggcggcgccactttcatccagtgccgc
gactgcggcgaagtcctgaaatgccgcaactgccgcctgcccttaggctttcacccggtg
gagaaccggctggtgtgccaccactgcaacgctcagtaccgggtgcctgccgtctgtccc
gtttgcggccgcagccgtatcaagtttatcggcctgggcacgcagaaactggaagaagag
acgaagaaggagtttccgggagtcaaaatcctgcgctgggactctgatgccgcccgagat
aaagataccggataccggattttcgatgatttccgcgccggcaaggcggatatcctgatc
ggcacccaggtcgtcgcccgcggcctcgacctgcccagggtgggactggtgggcgtcatc
aatgccgataccgcgctcaacctccccgatttccgggctggcgagcggaccttccagctt
ctgcttcaggtggcgggacgcgccgggcggggagagtttcccggccgggtcgttgtccag
agctaccagcccgcgcactatgccatcaccgcggcggtggcgcatgactataagggcttc
tatcaaaaagaactggagtatcgccgtctgctggggtatcctcccttcatcgaactggcg
gtgctcaccgtccagcatcctgcggaggcggatggcctgcagattgcccacaatctcaag
aagaaactggaattggaacgggattccaccggggccaaggacatcgagtttatcggcccg
gcgccggcgttcgttccccgccgccggggcaaataccgctggcaggttatcgtgaagggg
cgggatatcgttgatttcctggataaagcctgtctgtcttccggcgtcggcgtagacgtg
gatcccctcggtttggattaa
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