Dehalogenimonas formicexedens: Dform_02086
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Entry
Dform_02086 CDS
T04654
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dform_02086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfo03019
]
Dform_02086
Enzymes [BR:
dfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dform_02086
Messenger RNA biogenesis [BR:
dfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dform_02086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_RNAbd
PolyA_pol
tRNA_NucTran2_2
HD
Motif
Other DBs
NCBI-ProteinID:
APV45395
UniProt:
A0A1P8FAA3
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All DBs
Position
1972721..1974208
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AA seq
495 aa
AA seq
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MASLPDLVITDPGQLEIIAAAVVAAGRGERVSIVGGFIRDTLLGRPVKDLDLAVEGDAGA
FSGALAAKLGATMFVLHQEAGMYRINLAAGAFDQIDVTMVDGTLADDLMRRDFTADAMAA
PLTIPELTGNRLAIIDPANGLADTRNLILRAVSPGVFQSDPARLLRGVRLSAELGFAIEP
ETEKLIAENAALCQNVAGERTREDLVKLFSLPSMDSVVDYLDRLGLLTRIFPELEPSRGV
DQPIEHAWDVLGHQFKTVQSLDWVLRRGPWNYAPVEAQKLIPWTKTVQNYFESTVNSGAC
RTALTRLAALIHDIAKPETKTLAPNGRVRFYGHPGRGAETAVSMLTRLRFSQKEIKFIAA
MVELHMRPTQMGPDSIQPTPRAVYRFNRDAGDAAVATLYLSLADHLAARGPTLQLDNFAE
HVKIVTYVLSERDRQQAEAPDRLIDGNDLQSRFGLKPGPELGRILEELAEARATGEISTH
EEGLELAERLINTAK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttacctgatcttgtgattacagaccccggccagcttgagatcatcgcggcc
gccgtggtcgccgcgggccgcggcgaacgggtttccatcgtcggcggttttatccgcgac
accctgctgggccgtccggttaaggacctggatctggcggtggaaggtgatgccggcgct
ttttccggggctctggcggcaaaactcggcgccaccatgttcgttctacaccaggaagcc
gggatgtaccggatcaacctggctgcaggcgcgttcgatcagattgacgtcaccatggta
gatgggacactggccgatgacctgatgcgccgggacttcaccgcggacgccatggcggcg
ccgctgacgattccggagctgaccggtaaccggctggccattatcgatcctgccaacggc
ctcgccgacacccggaacctgattctccgcgccgtttcccccggcgtatttcaaagcgat
cccgcccgattgttgcgcggggtgcgcctgtccgccgaactgggcttcgccatcgagcct
gaaaccgagaagttgattgccgagaacgccgccctgtgtcagaacgtcgctggcgaacgc
acccgggaggacctggtcaaactgttttcgctgccgtcgatggactcggtagtggactat
ctcgaccggctggggcttttgacccggattttccccgaactcgagccttcgaggggcgtc
gaccagcccatcgagcacgcctgggatgtcttagggcatcagttcaagacggtccagtcc
ctggattgggtgctgcgccggggcccctggaactatgcccccgtcgaggcgcaaaaactg
atcccctggacaaaaactgtccaaaactactttgagtccaccgttaactcaggcgcctgc
aggacggcgttgacccgcctggcggccttgatccatgacatcgccaagccggagaccaag
accctggctcccaacggacgggtaaggttctacggtcacccaggccgcggcgccgaaacg
gcggtttcgatgctcacccgcctgcgcttctcccagaaggagatcaagtttatcgccgcc
atggtggaacttcacatgcgccccacccagatgggcccggactcgatccagcccaccccc
agggcggtctaccgcttcaaccgggatgccggcgatgccgccgtcgccaccctctattta
agcctggccgaccacctggcggcgcggggaccgacccttcagcttgataacttcgccgaa
catgttaaaatagtgacttatgttttgtccgagcgcgaccgtcagcaggcggaagcccct
gaccggctgatcgacggcaacgatctgcagtcgcggttcggcctgaagccgggaccggaa
ctcggccggatcctggaagagctcgccgaagcccgggcgaccggcgaaatcagcacccac
gaagagggtctcgagctggccgaacggttgatcaatacagccaaatga
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