Dehalogenimonas formicexedens: Dform_02199
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Entry
Dform_02199 CDS
T04654
Name
(GenBank) recombination protein RecA
KO
K03553
recombination protein RecA
Organism
dfo
Dehalogenimonas formicexedens
Pathway
dfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dform_02199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfo03400
]
Dform_02199
DNA repair and recombination proteins [BR:
dfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dform_02199
RecFOR pathway proteins
Dform_02199
TLS (translesion DNA synthesis) factors
Other SOS response factors
Dform_02199
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
Rad51
ATPase
AAA_25
ATPase_2
ABC_tran
AAA_22
AAA
AAA_24
TrwB_AAD_bind
AAA_14
CobU
AAA_16
nSTAND3
NACHT
AAA_35
P-loop_TraG
cobW
MobB
ATP-synt_ab
NTPase_1
AAA_18
AAA_33
ATP_bind_1
NB-ARC
RNA_helicase
CLP1_P
Thymidylate_kin
AAA_28
IstB_IS21
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
APV45502
UniProt:
A0A1P8FAM5
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All DBs
Position
complement(2076197..2077219)
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AA seq
340 aa
AA seq
DB search
MANIDLEKQRALEAAVGLIEKQFGKGAIMKLSEAASTMAVDVIPTGSISLDLALGVGGIP
RGRVTEIFGPEGSGKTTLAQHVIAQCQKQGGKAFYIDVEHAFDPKYAKTCGINLDELYIA
QPDTGEEALDICEKLVRSGGADLVVIDSVAALVPKAELEGDMGDSHVGLQARLMSQALRK
LTAAIGSTGTAVIFINQLREKVGIVFGNPEITPGGRALKFYASVRLDVRRVETLKSGNSA
IGTHVKVRVVKNKVAPPFRSAEFDILFDSGISREGNLIDLGVESNVIKKSGAFFSYGDVR
LGQGREAARNFLVQHPETADAVEKDIRAAAATNASFIETE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacattgacttagagaagcaaagagcactggaagcagccgtcgggctgatcgag
aagcaattcggcaagggcgccatcatgaagctgtcggaagcggcctccaccatggcggtg
gacgtcatcccgacaggctccatctcgctggacctggctttgggcgtcgggggcatcccc
cgcggccgggtgaccgagatcttcggtcccgagggttccggcaagaccacgctggcgcag
cacgtcatcgcccagtgtcagaagcagggcggcaaggctttctacatcgacgtagagcac
gccttcgacccgaaatacgccaagacctgcggcatcaacctcgatgagctttacatcgcc
cagcccgacaccggagaagaagccctcgatatctgcgaaaaactggtaaggtcgggcggc
gccgacctggtggtcatcgactcagtagccgccctggtgcccaaggctgagcttgaaggc
gacatgggtgattcccacgtcggcttgcaagcccgcctcatgagccaggccctgcggaaa
ctgaccgcggccatcggctcgacgggaaccgccgtcatcttcatcaaccagcttcgcgaa
aaagtgggcatcgtcttcggcaaccccgagatcacccccggcgggcgggcgctcaagttt
tacgcctcggtccggctggacgtgcgccgggtggagaccctgaaatccgggaactccgcc
atcggcacccacgtcaaggtcagggtggtcaagaacaaggtggcgcccccgttcaggagc
gccgaattcgacatcctgttcgattcgggcatttcccgcgagggcaacctgatcgatctg
ggcgttgaatccaacgtgatcaagaaatccggtgctttcttctcttacggtgatgttcgc
ctggggcagggacgggaggcggcgaggaatttcctcgtccagcatcccgagacggccgat
gccgtcgaaaaggatatccgtgccgcggcggccaccaacgcaagctttatcgaaaccgaa
tag
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