Dyadobacter fanqingshengii: NFI81_07520
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Entry
NFI81_07520 CDS
T08895
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dfq
Dyadobacter fanqingshengii
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfq03032
]
NFI81_07520 (topA)
03400 DNA repair and recombination proteins [BR:
dfq03400
]
NFI81_07520 (topA)
Enzymes [BR:
dfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NFI81_07520 (topA)
DNA replication proteins [BR:
dfq03032
]
Prokaryotic type
DNA Topoisomerases
NFI81_07520 (topA)
DNA repair and recombination proteins [BR:
dfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NFI81_07520 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
USJ37621
LinkDB
All DBs
Position
1850585..1853035
Genome browser
AA seq
816 aa
AA seq
DB search
MSKNLVIVESPAKAKTIESYLGADFTVKSSFGHVRDLPEHDMGVDVEHGFQPSYEISADK
VKVISELKKLAKGAEVWLATDDDREGEAISWHLKEALGLPDDTKRIVFREITKTALQNAI
SKPRIIDVDLVDAQQARRILDRLVGYELSPVLWKKIRIGKSNLSAGRVQSVAVRIIVERE
REIDAFRSKSSFKVTAHFDLGNGKVLNAELAKNFAQEDDAMKFLEKCLGAQFSIKSLEVK
PAKKTPAPPFTTSTLQQEASRKLSFSVAQTMTVAQRLYEAGKISYMRTDSTNLSEEALEK
ARVQITKEYGQDYYNKRIFKTKNESAQEAHEAIRPTDFSTLNGSSDRNEQRLYELIWKRA
IASQMSDAQLERTTATISISTTSEELVAQGEVIKFEGFLKVYLESSDDEGDEEQKGMLPP
LNINQILNLADMKATERFTRNPPRYTEASLVKKLEEMGIGRPSTYAPTISTILRREYIVK
EDRQGNEREFKELTLSNNQIVGKVNKEIYGSEKAKLFPTSTGMVVNDFLVSHFNDIIDYS
FTANVEKDFDNIADGQLEWRQMIKNFYTPFQKKVTEANEEAIDRSLTSRDLGEDPATGKK
VSVRIGKYGPYVQIGDAEDEEKPKFASLMKGQLMENITLDEAFELFKLPREVGLYEEKEL
IVNIGKFGPYVKHDGKYYSLARTDDPIAVTEDRLVEIITEKRLNDSNRTIKEFSEDPDAK
VLNGKYGPYIAFGKKNVKIPKGTEPASLTYEEVVKLAAETPDRPAGRGAKKPAAKAAVAK
APAEKKVADKKPAAKKPAAKKPAAKKAAAPKAAKKS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaatctggtgatcgtagagtcaccggcgaaggccaaaaccattgaaagttat
ttaggagcagatttcaccgtcaagtcaagtttcgggcacgttcgtgacctaccggagcat
gatatgggcgtggatgtagagcatggtttccagccttcttacgaaatttcagctgataaa
gtcaaggtgatatccgagcttaaaaaactggccaaaggcgcagaggtttggctggcaacg
gatgatgaccgcgaaggagaggcgatttcgtggcacttgaaagaagcgttggggttgcct
gatgataccaaaagaattgtgttccgggagattacgaaaaccgctttacaaaacgcgatt
tccaaaccccgtataatagatgtggatcttgtagatgcgcagcaggcacgcaggatcctc
gacaggcttgtaggttatgagctttctcctgtgctttggaaaaaaatacgcatcggaaaa
tcaaacctttcagcaggccgtgtgcaatccgttgcagtccggattatcgtagaaagagaa
agggaaattgatgccttcagaagcaaaagcagctttaaagtaaccgcgcattttgatctc
ggaaacgggaaagtcttaaatgctgaactcgccaagaattttgcgcaggaagacgatgcc
atgaaatttcttgaaaaatgccttggcgcacaattctctatcaaaagtcttgaagttaaa
ccagctaaaaaaacacccgcaccgccattcacaacctctacattacaacaggaagcatcc
agaaaactgagcttttccgtagcgcaaaccatgaccgtggcacagcggctttatgaagca
ggtaagatttcctatatgagaacggactccacaaatttgtcggaggaagcattggaaaaa
gccagggttcagatcacgaaggaatacgggcaggattactataataaaaggatattcaag
accaaaaacgaatcggcgcaggaggctcacgaagccatcaggccaactgatttttcaaca
ttaaatggcagcagcgaccggaatgagcagcgcttgtacgagctgatctggaagcgtgcg
attgcttctcaaatgtcagatgcgcaactggaacgcacaacggcaaccatttctatatcc
accacttcggaagaacttgttgcgcaaggtgaggtgatcaaatttgagggtttcctgaaa
gtatacctggaatccagcgatgatgaaggcgatgaagagcaaaaaggaatgctgcctcca
ttgaacattaaccagatcctgaacctggcagacatgaaggcgacggagcgttttacccga
aacccgccgcgttatacggaagcaagtttggtaaaaaagctggaagaaatgggcatcgga
cgtccatctacatacgcacctacgatttctactattttaaggcgtgaatacattgtaaag
gaagaccgtcagggaaacgaacgcgagttcaaagaactgacgctttcgaacaatcagatc
gttgggaaagttaacaaggaaatatacggttcagaaaaggcaaaactgtttccaacaagc
accggaatggtcgttaacgacttccttgtcagccacttcaatgacattatagattattct
ttcacagcgaatgttgagaaggactttgacaatatagcggacggccagctggaatggcgc
cagatgatcaaaaacttttatacaccattccaaaagaaggttaccgaggccaatgaggaa
gcgattgatcgcagcctgacctctcgtgatcttggtgaagatcctgcaacgggcaaaaaa
gtgtccgtgagaatcggaaaatatggtccttatgtgcagatcggcgatgccgaggatgaa
gaaaaaccaaagttcgccagtttaatgaaaggccagctgatggagaacattacgctggac
gaagctttcgaacttttcaaacttccgcgtgaagtaggtttgtatgaagaaaaagagctg
atcgttaacattgggaaattcggcccttatgtgaagcatgacggcaaatattattctttg
gccagaacggatgatcccatagcggttaccgaagacaggctggttgaaattatcactgaa
aagcgcctgaacgacagcaacaggaccatcaaagaattcagtgaagatcctgatgcaaaa
gtgcttaatggtaaatatggaccttacattgcttttggaaaaaagaatgtaaaaatcccg
aaaggcaccgagccagcatcattgacttacgaagaagtggtgaaactggcggcagaaaca
ccggacaggccggcaggaagaggcgcgaagaaaccagcggcgaaagcagcagtggcaaaa
gcaccggcagagaagaaagtagcggacaaaaaacccgcggccaagaagccagcagcaaaa
aagcccgcggcaaaaaaagcagcggcacccaaagcagcgaagaagagctaa
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