Dyadobacter fanqingshengii: NFI81_17845
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Entry
NFI81_17845 CDS
T08895
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NFI81_17845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfq03021
]
NFI81_17845
Transcription machinery [BR:
dfq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NFI81_17845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
Sigma70_ECF
HTH_23
HTH_5
ARL2_Bind_BART
HTH_11
HTH_40
HTH_28
Motif
Other DBs
NCBI-ProteinID:
USJ34566
LinkDB
All DBs
Position
complement(4311633..4312244)
Genome browser
AA seq
203 aa
AA seq
DB search
MEAKSFTNTLPSAHSQKSALENLFGKVVATGDYHAFRELFTHHYRSLCNYAMRVVITREI
AEEVVSDVFVKLWKNREQIEVHTSFQAYIYRAVRNQALDYLKLRIHRQNERESLDSVQWN
MSHADHFSPVEELTFNEFFDHVEGCIQALPRQCQIIFRLSREEGLRYRDIAEKLEISVKT
VETQMSRALKVLRERVPEHRLVA
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaaatcatttaccaacaccctaccatctgcccattcccagaaaagtgctttg
gaaaatttatttggcaaagtggtggcaaccggagattaccatgcttttcgtgaattgttt
acacatcattacagatctctttgtaattatgcaatgcgtgtggtgattacacgggagatt
gcggaggaagttgtttctgatgtgtttgtaaaactttggaaaaatcgcgagcagattgaa
gtgcatacttcgtttcaggcttacatttacagagcagtgagaaatcaggcgctggattac
ctgaaactcaggatccaccggcagaatgagcgggaatcgctggattcggtgcagtggaat
atgtctcacgcagatcatttttcgcctgttgaggaactgactttcaatgagtttttcgat
cacgtggaaggatgcattcaggctttgccaaggcaatgtcagatcattttccgtctcagc
cgcgaagaaggcctgcgttatcgcgacattgcggaaaagcttgaaatttcagtcaaaaca
gtggaaacacaaatgagccgggctttgaaagtcttgcgcgaacgcgttcccgaacatagg
ttagtagcataa
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