Dermatophagoides farinae (American house dust mite): 124489896
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Entry
124489896 CDS
T08043
Name
(RefSeq) putative uncharacterized protein DDB_G0271606
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124489896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfr03000
]
124489896
03019 Messenger RNA biogenesis [BR:
dfr03019
]
124489896
04121 Ubiquitin system [BR:
dfr04121
]
124489896
Enzymes [BR:
dfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124489896
Transcription factors [BR:
dfr03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
124489896
Messenger RNA biogenesis [BR:
dfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124489896
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124489896
Ubiquitin system [BR:
dfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124489896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
RNA_bind
zf-C3HC4_3
zf-UDP
RRM_3
Nup35_RRM_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
124489896
NCBI-ProteinID:
XP_046908249
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MVKSDIETAMINNNGSNAIVITGQQQQHSNGCHSYRTGQQQQQPQAATVIGTNTTNSLTA
NNNNSNNGIVVTTDYHDVSVECPLCMENLDIDDLDFFPCSCGYQVCRFCWHRLKNDDNGL
CPACRQPYPDSPIHFSAISIERVEELKKMKKKQKEKQKLKDGNKQNLSTIRVVQKNLLFV
IGISPRFTQDELRKEFSKYGKIVKMVINSSSAYITYTRPEDAVAAIKTLNDSSQQQQQQQ
QQQQQNGIQMMTKTSRNQLMTNNGGGISTLGGSILTSVKASLGTTKYCTHWLRSQSCPKQ
PDCMYLHEMAEQEASFTKEEMQAGKHTEYEKRLIQHYLDIIVAEREKEKQTLQQQQQQQQ
QQFFNNQSALHQNLSLLSLLQQQKQQQQNLDHFIQQQQQQSSNNNNPFGFNQNGLCMVGG
GPSSPTNNKLQQWQQQQNSLRQLLPNVNIKFQQQQQQQQQQQNDLNSFGHQQQMQNGGHH
QFLNGNGAFQQQSPRQMVQFWKNAGQQQQQQQQQTSPNCSPPSAE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaagtgatattgaaacagcgatgattaacaataatggttccaatgccattgta
ataactggacaacaacaacaacattcgaatggatgtcattcttatcgaactggtcaacaa
caacaacaaccacaggctgcaactgtaatcggaacaaatacaacaaatagtttgactgcc
aataacaataatagtaataatggaatagtagtaaccaccgattatcatgatgtttctgtt
gaatgtccattatgtatggaaaatttggatatcgatgatctcgatttttttccctgttct
tgtggttatcaagtttgtcgattctgttggcatcgtttgaaaaatgatgataatggtctt
tgtccggcttgtcgacaaccttatcctgattcaccaattcatttctctgcaatcagtatt
gaacgtgtggaagaattgaaaaaaatgaaaaagaaacaaaaggaaaaacaaaaactgaaa
gatggcaacaaacaaaatctttcaacaattagagttgtacagaaaaatttgttgtttgtg
atcggtatatcgccaagatttacacaggatgaattacggaaagaattttcgaaatatgga
aaaattgtcaaaatggtcatcaattcatcttcggcttatataacatatacaaggcctgaa
gatgctgttgcagcgattaaaacattgaatgattcatctcaacagcaacagcagcagcaa
caacaacaacaacaaaacggtatccaaatgatgacaaaaacatctagaaatcaattaatg
actaataatggtggtggaatatcaactttaggtggaagtattttgacatcggtaaaagca
tcattaggtacaacaaaatattgtacacattggctacgtagtcaatcatgtcctaaacaa
ccagattgcatgtatttacatgaaatggctgaacaggaagcatcatttacgaaagaagaa
atgcaagcaggaaaacatacagaatatgaaaaacgtttgatacaacattatcttgatatt
attgttgccgaacgggaaaaggaaaaacaaacgttacagcagcagcagcaacaacaacaa
caacaattctttaataatcaatcagcattgcatcagaatcttagtcttttatctttgtta
caacagcaaaaacaacagcaacaaaatttggatcattttatacaacaacagcaacaacaa
tcatctaacaataataatccatttggatttaatcaaaatggactttgtatggttggtggt
ggtccatcatcaccaacaaacaataaactacaacaatggcaacagcaacagaattcatta
agacaattgttaccaaatgttaacattaaatttcaacaacaacaacaacaacaacagcaa
caacaaaatgatttaaattcatttggccatcaacaacaaatgcagaatggtggtcatcat
caattcttgaatggaaatggtgctttccagcaacaatcaccaagacaaatggtacaattt
tggaaaaacgctggtcaacaacaacaacaacagcagcagcaaacatcgccgaattgttca
ccaccatctgccgaataa
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integrated database retrieval system
