Dermatophagoides farinae (American house dust mite): 124491969
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Entry
124491969 CDS
T08043
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124491969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfr03021
]
124491969
03041 Spliceosome [BR:
dfr03041
]
124491969
03036 Chromosome and associated proteins [BR:
dfr03036
]
124491969
Transcription machinery [BR:
dfr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124491969
Spliceosome [BR:
dfr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124491969
Complex B
124491969
Complex C
U2 SnRNP specific factors
124491969
Chromosome and associated proteins [BR:
dfr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
124491969
TFTC complex
124491969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
124491969
NCBI-ProteinID:
XP_046910664
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MHLYNLTLQRATHISLAVHGNFAGTKQQEIALAKGRILELVRPDPSTGKVYSLLSIDIFG
VIRSMIAFRLTGGSKDYLLVGSDSGRIVILEYIPAKNCFDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMISAVEKQKLVYILNRDATARLTISSPLEAHKSNTFVYHTVGVDVGFENP
MFACLEMDYEDVDIDHTGETAQQTQQQLTFYELDLGLNHVVRKYSENLEEHGNFLISVPG
GTDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRYDLDDPDRGMIFVCSASHKTKSMFF
FLVQSEQGDIFKITLEVDDDIVTEVKIKYFDTVPVATSLCVLRTGFLFVASEFGNHYLYQ
IVHLGDNDNEPEFSSSMPLNEGETFYFTPRSLKNLVLVDETESLSPIMHCQIADVANEET
PQLLMACGRGPRSTFRLLRHGLEVSEMAVSELPANPNAVWTVKKRSEDKYDAYIIVSFVN
ATLVLSIGETVEEITDSGFLGSTQTINCAQIGEDALVQVYPDGIRHIRADKRVNEWRAPG
RKQIVRCAINSRQVVIALGGGEIVYFEMDLGGQLNEYTERKDMNSEVICMALGDVPTGEQ
RCRFLAIGLADNTVRIISLDPLECLTPLSLQGLPARPESLSIVQMGLMKSDEKSKGKLYL
NVGLQNGVHLRTVLDENNGTLSDPQTRYLGSRPIKLFQVCMQGKESLLALSSRTWLCYYY
QNRFHLTPLSYEPLEYASGFSSEQCPEGIVAISHNTLRILALENLGNVFNQHLVELEYTP
RKFAIHPETYYVVMIETDHNALTPASKTVRKQQLAQEMIDSAPADEKQHVSEMAAAFLKE
NLPENVFGAPKPGPDTWASLIRVFNPVNGKTLHKFSLEQNEAAFSMTLCRFTNDPEGYYI
LVGVASRLRLLDRQHSGCEIHTYKFETDLEHLTLVHKTPVEDVPRAMAQFQGKVVIGVGK
LLRIYDLGKKKLLKKCENKTIQNFIVTINTMGNRIYVSDVQESYYFVRYKRSENQLIVFA
DDVFPRWVTCTCILDYDTIVCADKFGNVSIIRLPADVNDEIDDDPTGLKSLWDRGWLGGA
SQKAETICNFHIGDLVLSLNKATLIPGFSEALVYTTISGAVGVLVPFTSHEQLDFFQHLE
MYMRSENAPLCGRDHLAYRSFYFPVKNIIDGDLCEQFNSMDFSKQKSIAEDLDFSPAEVS
KKLEDMRTQYAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcatctctacaatttgacattacaacgtgccactcatatttctttggctgttcatgga
aactttgccggcactaaacagcaagaaattgctttggccaaaggccgaatactggaactt
gtacgtccagatcctagtactggtaaagtatattcacttctatccattgacattttcggt
gtcattcgttcgatgattgcttttcgtttgactggtggttcaaaagattatttgctcgtc
ggttctgattcaggccgtattgtcattcttgaatacattccggcaaaaaattgtttcgat
aaggttcatcaagaaacatttggtaaaagtggctgtcgccgtattgttcctggtcaatat
ttagctattgatccaaaaggtcgtgcagtcatgataagtgctgttgaaaagcaaaagtta
gtatacattcttaatcgagatgccacggctcgacttacaatttcttcacctcttgaagct
cataaatctaacacattcgtttatcatactgttggcgtggatgttggatttgaaaatcca
atgtttgcttgtcttgaaatggattatgaagatgttgatattgatcatacgggagaaaca
gcacaacaaacacaacaacaattaacattttatgaacttgatcttggtctcaatcatgtt
gttagaaaatatagtgaaaatcttgaagaacatggaaattttctcatatctgtaccgggt
ggaactgatgggccatcaggtgtattaatctgttcggaaaattatataacttataaaaat
ttcggtgaccagccagatattcgctgtccaatacctcgaagacgttatgatctcgatgat
cctgatcgaggaatgattttcgtttgcagtgcatctcataagaccaaatccatgtttttc
ttcctagtacaaagtgaacagggcgatatattcaaaattactcttgaagttgatgatgat
attgttaccgaagttaaaatcaaatattttgacactgttcctgttgccaccagtttatgt
gtgcttcgtactggattcttgtttgttgcttcagaatttggcaatcattatttgtatcaa
attgttcatcttggtgacaatgataatgagcctgaattcagtagttcaatgcctttgaat
gaaggtgaaactttttatttcacacctcgaagtttaaaaaatttggtcctggtcgatgaa
acagaatcactgtcaccaatcatgcactgtcagatagctgatgttgccaacgaagaaact
ccacaattattgatggcttgtggacgtggacctcgttctacttttcgactattgcgtcat
ggtttggaagtgtctgagatggctgtttcagaattacccgccaatccaaatgccgtttgg
acggttaaaaaacgtagcgaagataaatatgatgcctacattattgtctcgtttgtcaat
gcaacgcttgttctttcgattggtgaaactgttgaagaaattacagattcaggatttcta
ggctctacacaaacaatcaattgtgctcagattggtgaagatgcattagttcaagtatat
cctgatggtattcgacatattcgtgccgataaacgtgtgaatgaatggcgtgcaccagga
cgtaagcaaatcgtacgctgtgccataaattcccgtcaagtggtaattgcattaggcgga
ggagaaatcgtttactttgaaatggatctcggtggccaattaaatgaatacacagaacgc
aaagatatgaattcagaggtgatttgtatggctttgggcgatgtaccaactggtgaacaa
cgttgccgtttcttggcaattggtttggcagacaatactgttcgtattatctctttggat
ccattggaatgtttaacgccattgtcattacaaggtcttccagccagacctgaatcattg
tcaatcgtacaaatgggattgatgaaatctgatgaaaaatccaaggggaaattgtactta
aatgttggccttcagaatggagttcatttgcgtaccgttttggatgaaaataacggtaca
ctatcagaccctcaaactcgttatctcggtagtcgtcccattaaattgtttcaagtttgt
atgcaaggcaaagaatcattgcttgcattgtccagccgtacttggctctgttattattat
caaaatcgttttcatttgactcctctttcatatgaaccattggaatatgcttctggtttt
tcttctgaacaatgtccagaaggaattgtagctatttcacacaatactttgcgtatattg
gccttagaaaatctgggaaatgtattcaatcaacatttagtcgaattggaatatacgcca
agaaaatttgccatacatcctgaaacttattacgttgtaatgattgaaactgatcataat
gcattgacaccagcttcaaaaacagttcgtaaacaacaattggcacaagaaatgattgat
tctgcacctgctgatgagaaacaacatgtttctgaaatggctgcagcatttcttaaagaa
aatcttccggaaaatgtgtttggggcacctaaacctggccctgatacatgggcatcgttg
attcgagtttttaatccagtcaatggcaaaacactacataaattttctctggaacaaaat
gaagccgcatttagtatgactttatgccgttttacaaacgatcccgaaggatattatatt
ttagttggtgttgcaagtagattacgattattagacagacaacattctggttgtgaaatt
catacgtataaatttgaaaccgatcttgaacatttaactttagtacataaaacaccagtc
gaagatgttccaagagctatggctcaatttcaaggaaaagttgttataggcgttggaaaa
cttttacgaatttatgatctgggaaaaaagaaattactgaaaaaatgcgaaaacaaaacc
atacagaattttatcgttaccatcaatacaatgggcaatcgtatctatgtttctgatgta
caggaaagctattactttgttcggtacaagcgatcggaaaatcaattaattgtattcgcc
gatgatgttttcccacgttgggtgacctgtacatgtatacttgattatgatacgattgtt
tgtgctgacaaattcggcaacgtatcgatcattcgactaccggcagatgtcaatgatgaa
attgatgatgatcctaccggattgaaatctctttgggatcgtggatggcttggtggtgca
tcacaaaaagcggaaacaatttgtaattttcatattggtgatctggtactttcattgaac
aaagcaacattgataccgggattttccgaagcattagtttatacgacaatttcaggcgcc
gttggtgtattggttccattcacatcacacgaacaattggatttttttcaacatcttgaa
atgtatatgcgttcggaaaatgcaccactatgtggtcgtgatcatcttgcttataggtca
ttttattttccagtgaaaaatatcatcgatggtgatctctgtgaacaattcaattcaatg
gattttagcaaacagaaaagcattgccgaagatttagacttttcaccagcagaggtgtcg
aaaaaattggaggacatgagaacacaatatgcattctaa
DBGET
integrated database retrieval system
